Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02541 GTTCCAGCTTATGAAAGTCATGCTAATTCTATATCACTTTCAGCTTGGATGTGTTTAATGACAACATTGCaattaggggtggaaatgatagtgacattatttttAGAGCCAGACCTAAATTCTTGGATAATTAATACTCTACTTCAATTTGGTTGCATTTTATATTCAGGGGTTATGGGGTCTGGAGTAGTATTTATTCTCCAAGCATGGTGCATTTCAAGGAGAGGACCTCTCTTCTCTGCTATGTTTGCTCCTGTTTTCACATTATTTGTCACTGTAATGGCTGCCTTGTTGCTTCATGAGGAAATATACATTGGAAGCTTGATAGGTGCAATTGGAGTGATAATTGGTTTGTATATTGTGCTTTGGGGTAAAGCTGAAGATGTCATAAGGaaaacaaatccaaaatcagTTGATAATGAATCTTGTGGAAAAACATATTGCAAAACTGATTTGGAAGAGCCTCTTTTAATCGATAATCTACAATAA 489 0.3252 VPAYESHANSISLSAWMCLMTTLQLGVEMIVTLFLEPDLNSWIINTLLQFGCILYSGVMGSGVVFILQAWCISRRGPLFSAMFAPVFTLFVTVMAALLLHEEIYIGSLIGAIGVIIGLYIVLWGKAEDVIRKTNPKSVDNESCGKTYCKTDLEEPLLIDNLQ 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02541 162 Pfam EamA-like transporter family 7 122 IPR000620 GO:0016020|GO:0016021
Tsu04g02541 162 PANTHER WAT1-RELATED PROTEIN 3 134 IPR030184 GO:0016021|GO:0022857
Tsu04g02541 162 SUPERFAMILY Multidrug resistance efflux transporter EmrE 39 125 - -
Tsu04g02541 162 PANTHER WAT1-RELATED PROTEIN 3 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02541 Tsu-Chr4 28641419 28643147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02541 1 157 Nodulin-like Gene Family AT4G30420 47.590 5.77e-49 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02541 - - gmx:100812331 189.119