Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02534 ATGAAGAAGGAGAAAGTAATTGTAACCATTTTTCTGTTCTCAATACTCTCTTTTCAACACGCTTCTTCCTCGCCTCTCTTACACCAAAACCAGGTTTACGAGGAATCGTCTGATGGAAGTAGAAATCCAAAACAGGAGCAAGAGCGTGCTCCTGAAGTGCGTTGCTCCAGAGAGAGAAGTAGGGCTGCTTGGAAAGTAATAGAGGAGTATTTAACACCATTTGTGGAGAAAGAAAACTATCAGCTGTCAAAAAAGTGCAGACTTCATCTTGAGAATGATATGTTTAGGGATCAAGAAGAGCATAAAATATACCTTGACAGGAATGAATGGCAATGTGGATATTGCAAGAAAAGCTTCCGTGAAGAAAAATTTATTGATCAACATTTAGATAATAGGCACTACAATCTTCTGGATCTGAGTCATGGAAAATGCTTGGCTGATTTATGTGGGGCATTGCATTGTGATGCTGTGATGAATTCCAAGTCCTCTAGAAGCAAGTGTAATCCAGCAGCTGCTGCAAGAAACCGTCACTTATGTGAgAGTCTTGCTGACAGTTGTTTTCCTATAAGTGAGGGTCCATCAGCAAGCCGTCTTCACGAATTGTTTCTGCACCAATTTTGTGATGCTCACACCTGCTCAGGGAAACATAAACCCTTCTCTAGAGGAGGCAAGGATCAAGGAAGTTTCTTTCGCCTGGCTGCTGGAGCATTGATCTTGGTGTTACTTCCCGTGTTCTATCTCTTTCTTTATTTGATACAAAGTGATATGAAGGGTCGAAACCAAGAGCTTCGTCGCATCTCCAGAGCTGGATGGAAAGCAAAGCCATCATGA 831 0.4188 MKKEKVIVTIFLFSILSFQHASSSPLLHQNQVYEESSDGSRNPKQEQERAPEVRCSRERSRAAWKVIEEYLTPFVEKENYQLSKKCRLHLENDMFRDQEEHKIYLDRNEWQCGYCKKSFREEKFIDQHLDNRHYNLLDLSHGKCLADLCGALHCDAVMNSKSSRSKCNPAAAARNRHLCESLADSCFPISEGPSASRLHELFLHQFCDAHTCSGKHKPFSRGGKDQGSFFRLAAGALILVLLPVFYLFLYLIQSDMKGRNQELRRISRAGWKAKPS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02534 276 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 276 - -
Tsu04g02534 276 ProSitePatterns Zinc finger C2H2 type domain signature. 112 133 IPR013087 -
Tsu04g02534 276 MobiDBLite consensus disorder prediction 32 52 - -
Tsu04g02534 276 PANTHER ZINC FINGER PROTEIN-RELATED 4 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02534 Tsu-Chr4 28567345 28571860 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02534 35 276 C2H2 Transcription Factor Family AT5G63280 61.066 3.95e-106 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02534 - - ccaj:109814494 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02534 04 28567345 28571860 Tsu04g02534 04 28567345 28571860 ECH