Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02496 ATGGCCGCCACCACAACCACCAGTCTAGGCGGAGCTACTGGCGGCGGAGACGATCGAGTTCTCGCAACAGCTCAACAGATCTTAAAAAGCCTTAAAGCTCCAAAAGAAGATCGTGAAGACATGCTCTTAATCTTCTCCACCTTCGATAATCGTCTTTCCGGCATCACTGACCTAATCAACGGCGACGATTCAAAATCCTCCGATGGAGCCGATGATGATGACGAAGACCTTGACCGTTTCGAAGCCGCCGAGAAAGTTATACTCGTTGACGCTTCAATCTACACCGAGCCGTCGCGTCAATCGACTTCGTTATTCGATCCTCCGAATGATCCGGTTGAGTATTTCACCGCTGTTGATGAGATTATTCAGTGGATGGAACACTTTACGATTGCGCCGCCGCATCAATCGGCTGGGAAAACTGGTCAGATCATTTTGGACCGTGCTGAGAACGCGATACAGCTTGCTATGTCGAGGCTTGAAGATGAGCTTCGTCATGTGTTGATTTGTAATACTGTTCCGCCGGATTCTGTTAGCCGGTGCAGTACTAATCGGAGGAATTCGTTATCTTTCAGTTTGCACGACGGTGCGATCGATGATAATTCTAGTAGCTTTGGTGATGTAAGTGATCCTGGTTCTCATAGGTTTCATGAACGTGGTGTTAGTCTTGGAGatgatttgtttgttgatttggTTCGGCCGGAATCGATCATGAATCTGAAAGATATTATTGATCGTATGGTTAGGTCTGGTTATGAGAGGGAGTGCCTTCAGGTTTATAGTAGTGTTCGTCGTGACGCTTTGGTTGAGTGTTTGGCGATTCTTGGTGTTGAGAAGATGAGTATTGAAGATGTTCAGAAGGTTGAGTGGAAGAGTTTGGATGAGAAAATGAAGAATTGGGTACAAGCTGTTAAGGTTGTTTTTGGGGTTTTGTTGAGTGGGGAGAAGAGGCTTTGTGATAGTCTTTTTGGTGATTTGGATGATTTGAAGGAGATTTGTTTCAATGAAACCGCTAAAGGTTGTGttatgatgttgttgaatttTGGTGAAGCTGTTGCAATTTGTAAGAGGTCGCCGGAGAAGTTGTTTAGGATATTGGATATGTATGAGGCTTTGAGAGATGGTATGCCTGATTTGGAGGATATGGTAACTGATGAGTTTGTGATTACGGAGGCGAAGGGTGTGCTTAGAGGGCTTGGTGAGGCTGCAAAAGGGACATTTTCTGAATTTGAGAGTTGTATTCGGAATGAGACTTCCAGAAAGCCGGTTCTAACTGGGGATGTTCATCCTTTGCCTAGGTATGTTATGAATTACCTGAAACTGCTTGTGGATTATGGCGATGCCATGGATTCTCTTTTGCAAATCAGTGAAGAGGCTCTTTACCGGTTTACAAATGATTTGGGTGGCGATGGTTCTCAGTTAGAGGCTTTGTCCCCTTTAGGACGACAAATATTGCTGTTGATGTCTGAACTTGAATACAATCTTgatgaaaaatcaaaactttatgaAGACCTTGCATTGCAGCAGGTGTTTTTAATGAACAATCTGTATTATCTAGTGCGCAAAGTGAAGGACTCGGATCTTAGAGGGCTGTTGGGAGATGATTGGGTTCGTAAGCGCCGCGGTCAAGTACGACAGTATGCTACGGGATACCTCAGAGCCTCTTGGAGCAAGGCCTTGTCTTGTTTGAAAGATGAAGGGATTGGAGGGAGCTCTAATAATGCATCAAGGGTGGCTTTGAAGGAGAGGTTCAAGAGTTTCAACGCATGTTTTGAAGACATATACAGGGTTCAGACAGCTTGGAAGGTACCTGATGATCAACTTCGTGAAGAGATGCGGATAAATATATCAGAGAAGGTGATTCCTGCATACCGCTCATTTATGGGGCGATTTAGCGGTCAACTGGAGGGAAGACATGCAGGCAAATACATTAAGTATATACCAGAGGATCTAGAGACTTATTTATTAGATTTATTTGAAGGATCCCCTGCTGTATTGCATCACATAAAGAGAAAGAGTTAG 2019 0.4329 MAATTTTSLGGATGGGDDRVLATAQQILKSLKAPKEDREDMLLIFSTFDNRLSGITDLINGDDSKSSDGADDDDEDLDRFEAAEKVILVDASIYTEPSRQSTSLFDPPNDPVEYFTAVDEIIQWMEHFTIAPPHQSAGKTGQIILDRAENAIQLAMSRLEDELRHVLICNTVPPDSVSRCSTNRRNSLSFSLHDGAIDDNSSSFGDVSDPGSHRFHERGVSLGDDLFVDLVRPESIMNLKDIIDRMVRSGYERECLQVYSSVRRDALVECLAILGVEKMSIEDVQKVEWKSLDEKMKNWVQAVKVVFGVLLSGEKRLCDSLFGDLDDLKEICFNETAKGCVMMLLNFGEAVAICKRSPEKLFRILDMYEALRDGMPDLEDMVTDEFVITEAKGVLRGLGEAAKGTFSEFESCIRNETSRKPVLTGDVHPLPRYVMNYLKLLVDYGDAMDSLLQISEEALYRFTNDLGGDGSQLEALSPLGRQILLLMSELEYNLDEKSKLYEDLALQQVFLMNNLYYLVRKVKDSDLRGLLGDDWVRKRRGQVRQYATGYLRASWSKALSCLKDEGIGGSSNNASRVALKERFKSFNACFEDIYRVQTAWKVPDDQLREEMRINISEKVIPAYRSFMGRFSGQLEGRHAGKYIKYIPEDLETYLLDLFEGSPAVLHHIKRKS 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02496 672 Gene3D Exocyst complex component Exo70 97 665 - -
Tsu04g02496 672 SUPERFAMILY Cullin repeat-like 108 659 IPR016159 -
Tsu04g02496 672 PANTHER EXOCYST COMPLEX PROTEIN EXO70 67 671 IPR004140 GO:0000145|GO:0006887
Tsu04g02496 672 Coils Coil 145 165 - -
Tsu04g02496 672 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 67 671 - -
Tsu04g02496 672 Coils Coil 487 507 - -
Tsu04g02496 672 Pfam Exo70 exocyst complex subunit 297 655 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02496 Tsu-Chr4 28210223 28212848 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02496 18 672 EXO70 exocyst subunit family AT5G50380 56.808 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02496 K07195 - gmx:100809716 1078.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02496 04 28210223 28212848 Tsu04g02496 04 28210223 28212848 ECH