Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02494 ATGTCTTCATCCATTTATCACACCTTATTGTTACTTCTCCTTTGCTTTCTTCTCCAGAAACCCACCCAAGCAATCAAAAAGTCCTACATTGTATACTTGGGACCACAATCTTATGGTTCAAGTCTTTCAACTCTTGATGTTCAATCTGTCACAAACTTTCACTATAATTTGCTTAGCTCATACGTTGGAAGCACAAAGAAGGCCAAAGAAGCAATCTTTTACTCTTatagtaaatattttaatgGATTTGCCGCGGTgcttgatgaagatgaagctgCAATGGTTGCAAAGCATCCTGTCGTGGTATCAATTTTCTTAAACAAAGCAAGAGAACTTCACACAACTCACTCATGGGATTTTCTTGGATTAGAAAGAAATGGTGTTATTTCAAATAGTTCATTATGGAGCAAAACCAAAGGAAAAGATATCATTATTGGGAATCTAGATACTGGTGTTTGGCCCGAATCAAAGAGCTTTAGCGATGAAGGGATGGGTCCTGTTCCAACTAGATGGCGAGGAATTTGCGATGTTGACAAAAATAATACGGATAAATTTCACTGCAACAGGAAGCTAATTGGAGCAAGATATTTTTACAAAGGCTATTTAGCAAATATTTTTGGTCAAACACCAAATATATCATTTCATAGTGCACGTGACTTTGATGGTCATGGTTCACATACTTTATCAACTGCTGGAGGAAATTTCGTTGCCAATGCAAGTGTATTTGGCAATGGCAAAGGAACAGCAAGTGGTGGATCACCAAAAGCCCGAGTTGCGGCCTATAAGGTTTGTTGGCCACCCCTTGCCATGGGTGGCGGATGTTACGAAGCAGATATTTTGGCTGCTTTTGAAGCCGCGATAAGTGACGGCGTTGATGTTCTTTCGGTATCTTTGGGTGGTAGTAACGTCGAATTTTTAGAAAGCGGTATTTCTGTAGGGTCTTTTCATGCAATTGCCAAGGGCATTGTTGTAGTTGCTTCTTCAGGAAATTCAGGACCTACTCCCTCCGGTGCATCCAACTTGGAACCATGGATGATCACAGTTGGTGCAAGCACAATGGATAGATCTtttactagttatgttactCTTGGTAGCAAGAAAATACTCAAGggATCTAGTCTTTCAGAGTACAGCTTACCACCTCACAAGTTTTATCCATTAATAAGTGCAGTTGATGCCAAAGCTGTTGATGCTTCTTCTGCCAATGCTCTTCTTTGCAAAAATGGAACTCTGGATCCAAAAAAGGCTAAAGGAAAAATTGTTGTATGTCTTCGAGGCGATAATGATAGAACTGATAAGGGTGTACAAGCTGCTCATGTAGGTGCTGTTGGTATGATTTTGGTTAATAATGAAGAAACAGGGAATGAAATTCTAGCTGATCCTCATGTTCTTCCTGCTTCACATCTTACCTTTAAAGATGGCAACTACCTTTTTAATTACATTAACATCACCAAGTCTCCTATGGCTTCAATTTCTAGAGTCGAAACACAATTGGGTGTAAAGCCAGCTCCAGTTATGGCTTCATTTTCATCAAGAGGGCCTAATATCCTTGATCCATCAATCCTCaagCCTGATATCACTGCACCAGGCGTCAACGTAATTGCGTCTTATAGTGAATTTTCATCTCCTTCAGAAAATGAATCCGATAAGCGAAGAACTCCTTTCATTACTATGTCAGGCACTTCAATGTCATGTCCTCATGTAGCTGGACTTGTTGGACTTCTTAAATCTCTTCATCCTAATTGGAGTCCGGCTGCTATCAAGTCAGCAATCATGACCACAGCGACAACAAAAGACAACACCGGAGAGCATTTACTTGATTCACTAGGAAAAGCAACTCCTTTTGCCTATGGTGCTGGGCATGTTCGACCTAATCTTGCTGCAGATCCTGGACTTGTTTATGACCTAAATATTACCGATCATTTGAACTTTTTATGTGGTCATGGATACAATAGTGACCAACTTAAACCGTTCTACGGAAAACCTTAtacttgtcccaaatctttcaATTTGCTAGATTTCAATTATCCAACCATCACAATTCCTCAGTTTAAAATTGGACAATCTCTGACCGTTACTCGTACTGTAACCAATGTTGGATCGCCTAGTAAGTATAGAGTGCGCATCGAGGCACCCTCGGAATTACTAGTTTCAGTGGAGCCTAAGAAACTACTCTTTAAGGAAAAGGGTGAGAAAAAAGACTTCAAGGTTACATTTACTTTGAAGCAACAAAGTAAGTATAAGACTGACTACATCTTTGGAAAATTGATTTGGACCAATGGAAGACATCGTGTTGGGACACCTATTGTAATAAAGTATCCACAATAG 2328 0.387 MSSSIYHTLLLLLLCFLLQKPTQAIKKSYIVYLGPQSYGSSLSTLDVQSVTNFHYNLLSSYVGSTKKAKEAIFYSYSKYFNGFAAVLDEDEAAMVAKHPVVVSIFLNKARELHTTHSWDFLGLERNGVISNSSLWSKTKGKDIIIGNLDTGVWPESKSFSDEGMGPVPTRWRGICDVDKNNTDKFHCNRKLIGARYFYKGYLANIFGQTPNISFHSARDFDGHGSHTLSTAGGNFVANASVFGNGKGTASGGSPKARVAAYKVCWPPLAMGGGCYEADILAAFEAAISDGVDVLSVSLGGSNVEFLESGISVGSFHAIAKGIVVVASSGNSGPTPSGASNLEPWMITVGASTMDRSFTSYVTLGSKKILKGSSLSEYSLPPHKFYPLISAVDAKAVDASSANALLCKNGTLDPKKAKGKIVVCLRGDNDRTDKGVQAAHVGAVGMILVNNEETGNEILADPHVLPASHLTFKDGNYLFNYINITKSPMASISRVETQLGVKPAPVMASFSSRGPNILDPSILKPDITAPGVNVIASYSEFSSPSENESDKRRTPFITMSGTSMSCPHVAGLVGLLKSLHPNWSPAAIKSAIMTTATTKDNTGEHLLDSLGKATPFAYGAGHVRPNLAADPGLVYDLNITDHLNFLCGHGYNSDQLKPFYGKPYTCPKSFNLLDFNYPTITIPQFKIGQSLTVTRTVTNVGSPSKYRVRIEAPSELLVSVEPKKLLFKEKGEKKDFKVTFTLKQQSKYKTDYIFGKLIWTNGRHRVGTPIVIKYPQ 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02494 775 ProSitePatterns Serine proteases, subtilase family, serine active site. 560 570 IPR023828 -
Tsu04g02494 775 Pfam PA domain 406 477 IPR003137 -
Tsu04g02494 775 ProSiteProfiles Serine proteases, subtilase domain profile. 117 628 - -
Tsu04g02494 775 SUPERFAMILY Subtilisin-like 112 632 IPR036852 GO:0004252|GO:0006508
Tsu04g02494 775 Gene3D Peptidase S8/S53 domain 142 640 IPR036852 GO:0004252|GO:0006508
Tsu04g02494 775 Gene3D - 354 498 - -
Tsu04g02494 775 PRINTS Subtilisin serine protease family (S8) signature 559 575 IPR015500 -
Tsu04g02494 775 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Tsu04g02494 775 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Tsu04g02494 775 Pfam Fibronectin type-III domain 673 771 IPR041469 -
Tsu04g02494 775 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 24 771 IPR045051 -
Tsu04g02494 775 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.3 24 771 - -
Tsu04g02494 775 Gene3D - 645 773 - -
Tsu04g02494 775 CDD PA_subtilisin_like 360 491 - -
Tsu04g02494 775 SUPERFAMILY PA domain 403 482 IPR046450 -
Tsu04g02494 775 Pfam Subtilase family 140 604 IPR000209 GO:0006508|GO:0008236
Tsu04g02494 775 CDD Peptidases_S8_3 111 596 IPR034197 -
Tsu04g02494 775 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 113 IPR037045 -
Tsu04g02494 775 Pfam Peptidase inhibitor I9 28 113 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02494 Tsu-Chr4 28159791 28177033 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02494 17 772 Subtilisin-like Serine Gene Family AT5G59810 57.839 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02494 - - cam:101513266 1051.97