Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02493 ATGtcatcattcattcatcatGTGTTAGTTTCActtcttatttgtgttttgtggcAAGAACCTACCATAGCTATCAAACAGGCAAGTTTTtCCTATATTGTATACTTAGGATCACATTCTTTTGGTCCAAATCCTTCATCATTTGATATTGAATCTGCTACAAACTCTCACTATGATTTACTTGGATCTTACCTTGGAagCACTGAGAAGGCCAAAGAAGCAATATTTTATTCctataataaaaacattaatGGCTTTGCTGCAATACTTGATGAAAATGAAGCTGCAAAGATTGCAAAGCATCCTAATGTAATATCAATTTTCTtgaacaaaaaacacaaacttCAAACTACGCATTCATGGAATTTCCTTCAGTTAGAGAGTGATGGTGAAATTCCAAAGGATTCAATTTGGAAGAGATCGTTTGGTGAAGACATCATCATTGGAAATATAGACACCGGTGTTTGGCCTGAATCCAAGAGTTTTAGTGACGAAGGGATGGGACCAATTCCAAAAAAATGGCGTGGGATTTGTCAAGTTGATAACCAGAATCAAGATAAATTTTACTGCAACAAGAAGCTTATCGGAGCAAGATATTTTTACAAAGGTTATCTAGCAAAGCATGGTAAAGGTCTTCAAAATGTATCATTTAACAGTGCACGCGACTTTCAAGGTCATGGTTCACATACTCTATCAACTGCTGGAGGAAATTTTGTTGCAAATACAATTGTATTTGGTAATGGCAACGGAACATTAAGTGGTGGATCGCCAAAAGCACGAGTTGTATCTTATAAGGTTTGTTGGTCACCGGAAAGTGGATGTTATGATGCGGACATTTTGGCTGCTTTTGAAGCTTCCATAAGTGATGGTGTTGATGTGCTTTCTGTTTCTTTAGGAAGTTTTCAAGTAGAATATTATGAAACTGGTCTTTCTATAGGGTCGTTTCATGCAGTTGCTAATGGCATTACTGTAGTGAGTGCTGGTTCAAATTATGGACCTTATCTTAGCACTGTAGGCAACTTGGAACCATGGGTGATAACAGTTGCAGCAAGTACTATGGATAGAGAGTTTAATAGTTTTGTTACTCTTGGTAACAACAAAACACTCAAGGGTGCTAGCTTTTCAGAGTTGGAATTGCAACCTCATAAGATGTATCCATTGATAAGTGGTGCTGATGCCAAATATGATAATGCATCATCCAAAGATGCCCTTAATTGCACTGGTGGAACTCTTGATCCAAGAAAAGCTAAGGGGAAAATATTGATTTGTCTTCATAGTCAAGAAGATTGTCCCTTTCTTTGTAGAACTCACAAGGGTGTTGAAGCTACTCGTGTAGGTGCTGTTGGAATGATTTTGGCTAATGATGAGAATTCAGGGAGTGGAATTCAAGCTGACCCTCACGTGCTTCCTTCTTCATATGTTAACTTTATAGATGGAagttacatttttaattacattaaCCACACCAAGTCTCCTGTGGCTTACATTTCTAAAGTGGTAACAGAAATAGCTACAAAGCCAGCTCCTTTTATCGCTTTCTTTTCAGCAAGAGGACCAAACCCCGTTGAGCCAACAATCCTCAAGcCTGACATCACAGCACCGGGAGTCAACATAATTGCTGCTTACAGTGAAGCTATATCTCCCTCGGAGCAAGCATCTGATAAACGTAGAATACCTTTCAATGTTATGTCAGGAACATCGATGTCATGTCCTCATGTTGCTGGCCTAGTTGGGCTGCTTAAATCTATTCATCCTGATTGGAGTCCAGCCGCTATCAAGTCAGCAATCATGACAACAGCAACAACGGAAGACAACACTGGAGGACCTATATTGGATTCATCACTAGAAAAGGCAACTCCATTTGACTACGGTGCAGGACATGTTCAACCTAATCGTGCAGTAGACCCTGGACTTGTATATGACCTAAATGCTACTGATTATATGAATTTTCTGTGTGCTCGTGGCTACAACAGCTCTATGCTTAAGTTATTCTACGGCAAGCCTTACACTTGTCCAAAGTCCTTCAATTTGAAGGATTTCAATTATCCGGCAATCACAATTCTAGACTTTAAAGTTGGACAAACTATAAATGTTACTCGTACTCTTACCAACGTGGGGTCTCCAAGTAACTATACAGTGCGCATTCAGGCTCCACCAGAATTTGTAGTTTCTGTTGAGCCTAAGGTACTGAGCTTTAATCAAAAGGGTGAAAAAAATGAGTTCAGAGTTACATtaagcttcagcccaaaaagtAAGGATAAGTCTGATTATGTCTTTGGAAGGTTAATTTGGACTAATGGGGTGAACAATGTTGGGATACCTATTGCACTTAACTATCCACATTAG 2346 0.3743 MSSFIHHVLVSLLICVLWQEPTIAIKQASFSYIVYLGSHSFGPNPSSFDIESATNSHYDLLGSYLGSTEKAKEAIFYSYNKNINGFAAILDENEAAKIAKHPNVISIFLNKKHKLQTTHSWNFLQLESDGEIPKDSIWKRSFGEDIIIGNIDTGVWPESKSFSDEGMGPIPKKWRGICQVDNQNQDKFYCNKKLIGARYFYKGYLAKHGKGLQNVSFNSARDFQGHGSHTLSTAGGNFVANTIVFGNGNGTLSGGSPKARVVSYKVCWSPESGCYDADILAAFEASISDGVDVLSVSLGSFQVEYYETGLSIGSFHAVANGITVVSAGSNYGPYLSTVGNLEPWVITVAASTMDREFNSFVTLGNNKTLKGASFSELELQPHKMYPLISGADAKYDNASSKDALNCTGGTLDPRKAKGKILICLHSQEDCPFLCRTHKGVEATRVGAVGMILANDENSGSGIQADPHVLPSSYVNFIDGSYIFNYINHTKSPVAYISKVVTEIATKPAPFIAFFSARGPNPVEPTILKPDITAPGVNIIAAYSEAISPSEQASDKRRIPFNVMSGTSMSCPHVAGLVGLLKSIHPDWSPAAIKSAIMTTATTEDNTGGPILDSSLEKATPFDYGAGHVQPNRAVDPGLVYDLNATDYMNFLCARGYNSSMLKLFYGKPYTCPKSFNLKDFNYPAITILDFKVGQTINVTRTLTNVGSPSNYTVRIQAPPEFVVSVEPKVLSFNQKGEKNEFRVTLSFSPKSKDKSDYVFGRLIWTNGVNNVGIPIALNYPH 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02493 781 ProSitePatterns Serine proteases, subtilase family, serine active site. 565 575 IPR023828 -
Tsu04g02493 781 Pfam Peptidase inhibitor I9 31 115 IPR010259 -
Tsu04g02493 781 Pfam PA domain 392 480 IPR003137 -
Tsu04g02493 781 SUPERFAMILY Subtilisin-like 115 638 IPR036852 GO:0004252|GO:0006508
Tsu04g02493 781 Gene3D - 651 779 - -
Tsu04g02493 781 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.3 27 776 - -
Tsu04g02493 781 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 116 IPR037045 -
Tsu04g02493 781 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 776 IPR045051 -
Tsu04g02493 781 Gene3D Peptidase S8/S53 domain 145 647 IPR036852 GO:0004252|GO:0006508
Tsu04g02493 781 CDD Peptidases_S8_3 113 601 IPR034197 -
Tsu04g02493 781 Pfam Subtilase family 143 608 IPR000209 GO:0006508|GO:0008236
Tsu04g02493 781 Gene3D - 354 504 - -
Tsu04g02493 781 PRINTS Subtilisin serine protease family (S8) signature 564 580 IPR015500 -
Tsu04g02493 781 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Tsu04g02493 781 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Tsu04g02493 781 CDD PA_subtilisin_like 361 496 - -
Tsu04g02493 781 Pfam Fibronectin type-III domain 679 776 IPR041469 -
Tsu04g02493 781 ProSiteProfiles Serine proteases, subtilase domain profile. 120 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02493 Tsu-Chr4 28146291 28151164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02493 16 778 Subtilisin-like Serine Gene Family AT5G59810 55.671 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02493 - - cam:101513266 992.26