Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02490 ATGGAAAATCACCTAAACAGAGAACTCGATCTTCTCCCACCGCCACGTACCGATTCATCCCTCCTCCGTCTCcgatcatcttcatcatcaaaatcagaaCGCGGCGGTCCATCACTCGACCTACAGCTCTCAATCAGTGTCGGTCCACCATCGATGCTGATGTGCGACGGCGTAGAGTCTCTTAAATGGGAAGCATCGGAGCAAATCCGTCTCGCGGCGATGGAAAAAGCGTACGCGGAGAGAGTAAGAGAGTTAACAAGAAGAGAGATGGAAATGGCGCAATCGGAGTTCGCACGTGCGAGACAAATGTGGGAGCGTGCGAGAGAAGAAGTTGAAAGAGCTGAAAGGATCAAAGAAAGAGCAATAAGACAGGTTGATTCGAGTTGTATGGAAATTACCTGTCATTCTTGTAGACAGAGATTCAAACCTGCTTCTGCTTGA 441 0.4649 MENHLNRELDLLPPPRTDSSLLRLRSSSSSKSERGGPSLDLQLSISVGPPSMLMCDGVESLKWEASEQIRLAAMEKAYAERVRELTRREMEMAQSEFARARQMWERAREEVERAERIKERAIRQVDSSCMEITCHSCRQRFKPASA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02490 146 PANTHER OS03G0310200 PROTEIN 1 143 IPR039288 GO:0009630
Tsu04g02490 146 Coils Coil 83 124 - -
Tsu04g02490 146 MobiDBLite consensus disorder prediction 20 39 - -
Tsu04g02490 146 PANTHER OS03G0310200 PROTEIN 1 143 - -
Tsu04g02490 146 MobiDBLite consensus disorder prediction 1 42 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02490 42 142 C2H2 Transcription Factor Family AT2G01940 35.577 5.04e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02490 - - gmx:100819947 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02490 04 28131320 28132049 Tsu04g02490 04 28131320 28132049 ECH