Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02475 atGGCTTCAAATTTTTGCAAACCTTCACGTAGTGATAATGCtctaacaataaaaacaagcaAATATGCTTCCAAGCCTACCCTTATGCTGAAGGACTATCTCAGAGACGATCTGAGCTCATGTTCATCGAGCGGTTTCAAATCGTTCCCACGACGACAATGCTGCACCACCGTTGGATTTTTACTAGAAAAAGATCACCAACTCAAACACAAGAAGAGGAAAACAAACACGACACTTCCTCGACGCCGCCCCACCGTAACTGCTCTTCAAAGAGCTTCCGAAGCGGTTATAACTGCTATAAAATCACTGTCCTCACAAAAGAAAGCTTCTACCGGTGTTCTTTCTAGAAGCTTCTCGAGGAAGCTATTAAGCAGAAGGTTCTGGAGAAAAGCGGCGAAGGAACAGGGAAGTGAAGGTGTACTGAAGTGTAGGAGATCATTCCGGGAACTACTTATGCAGGAAAGAGACTATAAACCGACGTCGTTTAGTGAAGATACTATATTTGCTGCCAAAAGCATCACTAGCGTTTCTTCTGGTTGTTGCAGTAACAGCTGGGGAGAAAGTGAATTTACGTTTTCGTCAAACGCTACTTCTTCCGACAGCTCCATCGAAAATGACTTAGTTGACGGCGGCAAAGACGGCGCTTCCCCTCAGCACAAGATAGAAGGAGTAACACAtgggGATTGGTCAAATGAGAAGGAGCAATTCAGTCCTGTATCAATACTAGATTGCCCATTTGAAGATGAACAAGAGATGAAATCTCATTCAATGATCAATTCTTTCTTCCAAGGAGCAGAAAACAAGCATATGCAGAAGAGAAGACATTTTGAGAATCTAGCAGCTTCACCGGAGCCATTGGATTTAGAGAAAAGGATCAATTGCATAGAACTGGAAAATGAACAACACAATCATTCTACAAAACAATGTTCATTATTAAAATCAATTACTGGAAACAACAAAGTTGAGGAAGCCCTCAATTCTGTCCAAAGATCATTTCCATGCAACAGTTTGATGATTAACACAGAGAAACTACTGTTTGATTACTTAGAACAAATCATTGAGGAAAATAACAAAGATAATAATTATTCAAAGAAGCTTAATCTTTGCAATGTAGTAGAGGATTGGATACAAGGACAACCTCAAGAACCATATTTGGGTTGGGAAGTGAAAGAAGGAAGACATGTCTACATTAGTGAGATGGAAAAAAGTGGAGACTGGAAAAACTGTGATCAAGAAACAGAACAACTTGTTCTAGAGCTGGAAAATGAGTTATTAACTAGTTTGGTTGATGAGATTGTTCATGATCTTGTGATATGTTAG 1320 0.3924 MASNFCKPSRSDNALTIKTSKYASKPTLMLKDYLRDDLSSCSSSGFKSFPRRQCCTTVGFLLEKDHQLKHKKRKTNTTLPRRRPTVTALQRASEAVITAIKSLSSQKKASTGVLSRSFSRKLLSRRFWRKAAKEQGSEGVLKCRRSFRELLMQERDYKPTSFSEDTIFAAKSITSVSSGCCSNSWGESEFTFSSNATSSDSSIENDLVDGGKDGASPQHKIEGVTHGDWSNEKEQFSPVSILDCPFEDEQEMKSHSMINSFFQGAENKHMQKRRHFENLAASPEPLDLEKRINCIELENEQHNHSTKQCSLLKSITGNNKVEEALNSVQRSFPCNSLMINTEKLLFDYLEQIIEENNKDNNYSKKLNLCNVVEDWIQGQPQEPYLGWEVKEGRHVYISEMEKSGDWKNCDQETEQLVLELENELLTSLVDEIVHDLVIC 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02475 439 PANTHER OS04G0572500 PROTEIN 11 436 - -
Tsu04g02475 439 PANTHER OS04G0572500 PROTEIN 11 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02475 Tsu-Chr4 27958136 27961577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02475 9 436 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 30.957 1.92e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02475 - - cam:101506843 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02475 04 27958136 27961577 Tsu04g02475 04 27958136 27961577 ECH