Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02467 ATGGCTCATTTCCTTTTCATTGCTCTCACTTTTGTGTTGAGCTTCCATATTCATTTTACTCGAGGAAGTGAATTGCGTCCTACTACCGAAACAAGCAGTTCAAAAATATACATTATACATGTGAATGAGCTAGAGGGTAAGATGTTTACTCAATCAGATTCAAAAGAAGATTTAGAAAGTTGGCATCATTCATTCATGCCAGCTACTGTTATGAGTTCTAATGAACAACCGCGAATGATTTATTCATACCGAAATGTGTTGAGTGGTTTTGCTGCAAGACTCACTCAAGAAGAACTTAGAGCTGTGGAACAGAAAAATGGCTTCATTTCAGCTCATCCTGAAAGGACATTACGTCGTCAAACCACACATACCCCAAGTTTCTTGGGGTTGCAGCAAAATGTAGGATTGTGGAAGGATTCAAATTTTGGAAAGGGAGTTATTATTGGTGTTTTGGATTCAGGAATTACACCTGATCATCCTTCGTTCGATGATGCGGGcataccaccaccaccatctaAATGGAAAGGACGATGCGAACTTAATGGTACAGCttgtaacaacaaattaatcgGAGCAAGATCCTTCAACAATGTGGTTACTAAAGCTGAGGCACCAATTGATGAGGATGGACATGGGACTCACACAGCAAGTACAGCGGCTGGTGCTTTTGTCGACAATGCAGATGTGCTAGGAAATGCCAAAGGTACAGCAGCAGGGATTGCCCCTCATGCTCACCTAGCAATTTACAAAGTATGCTTTGGTGAAGACTGTCCCGAGAGTGATATACTCGCAGCATTAGACGCAGCGGTGGAGGATGGTGTCGATGTAATATCAATATCGCTTGGTCTAAATGAGCCACCTCCATTTTTCAACGATAGCACTGCCATAGGCGCATTTGCAGCAACGCAAAAGGGAATATTTGTAAGTTGTGCAGCAGGAAACGCTGGACCTTCTGAAGGCTCCTTGGTTAATGGAGCCCCATGGATCCTCACAGTCGGAGCTAGCACTATCGACAGAAGCATTGTAGCAACAGCAGTGCTAGGAAATGGGGAAGAATTTGATGGTGAAACTGTTTTCCAGCCTTCTGATTTCTCTCCAACTTTGTTGCCCTTAGCATATGCAGGAGTGAATGGCAAACCAGAATCTGCAATTTGTGCTAATGGATCCTTGAATGACATTGATTTCAGAGGCAAGGTTGTTTTGTGTGAGAGGGGAGGGGGTATAGGAAGAATTGCCAAAGGACAGGAAGTAAAAAGAGTAGGTGGTTCAGCCATGATTCTCACGAATGATGAAATCAATGCTTTCAGTCTCTCGGCTGATGTACATGTCCTACCAGCAACACATGTAAGCTATGATGCCGGACAAAAGATCAAGGCCTATATAAATTCAACTTCAACACCTACAGCAACCATTTCGTTTAAGGGAACGATTATTGGAAACTCACAATCTCCAGCTGTTGCATCATTCTCTTCAAGAGGTCCCAACTTGCCGAGCCCTGGGATACTAAAACCAGATATCATAGGACCAGGCGTGAACATCCTAGCTGCCTGGCCATTCCCCGTGAATAACAGCAccaattcaaaaatcaatttcaacATTGAGTCAGGCACATCAATGTCATGCCCACATCTTAGCGGCGTTGCTGCTTTGCTCAAAAGCTCTCATCCTGATTGGTCGCCCGCAGCCATAAAATCTGCCATAATGACTTCCGCAGACACATTAGATTTAGAAAAGAAACTCATTGTTGACGAAACACTTCAGCCGGCAAATATCTTTGCCACAGGTTCGGGCCACGTGAATCCATCAAGAGCAGATGATCCTGGGTTAGTATATGATATCCAACCTGACGATTATATACCTTATCTATGTGGTTTAGGTTACAGTGATAGTCAAGTTGGAATCATTGCACACAAGAAAATTAACTGCACTGAGACGTCAAGCATTCCCGAAGGAGAGCTTAACTATCCCTCATTTTCTGTCGTGCTTGGCTCCTCACAGACATTCACACGGACAGTGACAAATGTCGGTGAGGCCTACTCATCTTATGTTGCCATAGTTACGGCACCAAAAGGAGTTGATGTGAAAGTCCAGCCAAAAAAGCTTTACTTTTCAGAAGCCAACCAAAAACAGACATATTCAGTGACATTCAATCGTATAGGGTATGGTAATAAGACAGGAGAATATGCTCAAGGATTTCTAAAATGGGTTTCTGCTAAACACACTGTCACGAGCCCTATCTCGGCCAAATTTGCATAG 2256 0.4238 MAHFLFIALTFVLSFHIHFTRGSELRPTTETSSSKIYIIHVNELEGKMFTQSDSKEDLESWHHSFMPATVMSSNEQPRMIYSYRNVLSGFAARLTQEELRAVEQKNGFISAHPERTLRRQTTHTPSFLGLQQNVGLWKDSNFGKGVIIGVLDSGITPDHPSFDDAGIPPPPSKWKGRCELNGTACNNKLIGARSFNNVVTKAEAPIDEDGHGTHTASTAAGAFVDNADVLGNAKGTAAGIAPHAHLAIYKVCFGEDCPESDILAALDAAVEDGVDVISISLGLNEPPPFFNDSTAIGAFAATQKGIFVSCAAGNAGPSEGSLVNGAPWILTVGASTIDRSIVATAVLGNGEEFDGETVFQPSDFSPTLLPLAYAGVNGKPESAICANGSLNDIDFRGKVVLCERGGGIGRIAKGQEVKRVGGSAMILTNDEINAFSLSADVHVLPATHVSYDAGQKIKAYINSTSTPTATISFKGTIIGNSQSPAVASFSSRGPNLPSPGILKPDIIGPGVNILAAWPFPVNNSTNSKINFNIESGTSMSCPHLSGVAALLKSSHPDWSPAAIKSAIMTSADTLDLEKKLIVDETLQPANIFATGSGHVNPSRADDPGLVYDIQPDDYIPYLCGLGYSDSQVGIIAHKKINCTETSSIPEGELNYPSFSVVLGSSQTFTRTVTNVGEAYSSYVAIVTAPKGVDVKVQPKKLYFSEANQKQTYSVTFNRIGYGNKTGEYAQGFLKWVSAKHTVTSPISAKFA 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02467 751 Pfam Fibronectin type-III domain 652 747 IPR041469 -
Tsu04g02467 751 SUPERFAMILY Subtilisin-like 120 609 IPR036852 GO:0004252|GO:0006508
Tsu04g02467 751 SUPERFAMILY PA domain 388 468 IPR046450 -
Tsu04g02467 751 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 747 IPR045051 -
Tsu04g02467 751 Pfam Subtilase family 143 574 IPR000209 GO:0006508|GO:0008236
Tsu04g02467 751 CDD Peptidases_S8_3 120 572 IPR034197 -
Tsu04g02467 751 Gene3D - 338 478 - -
Tsu04g02467 751 Pfam Peptidase inhibitor I9 37 118 IPR010259 -
Tsu04g02467 751 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 119 IPR037045 -
Tsu04g02467 751 Gene3D Peptidase S8/S53 domain 145 618 IPR036852 GO:0004252|GO:0006508
Tsu04g02467 751 Pfam PA domain 382 457 IPR003137 -
Tsu04g02467 751 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 148 159 IPR023827 -
Tsu04g02467 751 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Tsu04g02467 751 PRINTS Subtilisin serine protease family (S8) signature 207 220 IPR015500 -
Tsu04g02467 751 PRINTS Subtilisin serine protease family (S8) signature 535 551 IPR015500 -
Tsu04g02467 751 Gene3D - 622 750 - -
Tsu04g02467 751 CDD PA_subtilisin_like 344 471 - -
Tsu04g02467 751 ProSiteProfiles Serine proteases, subtilase domain profile. 127 605 - -
Tsu04g02467 751 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 32 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02467 Tsu-Chr4 27850730 27852985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02467 28 747 Subtilisin-like Serine Gene Family AT1G04110 45.263 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02467 - - gmx:100812208 1222.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02467 04 27850730 27852985 Tsu05g00324 05 2416372 2418645 PCT