Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02462 ATGTCTTCACTCACAAATTTCATAAAAGATTGGTTCAGTGCTGCTGACACCACCACACTCATCGTACCATTCTTAATAATTACCACGGTAACTTGgtatttttatctcttttttatcAACTCCAAAACCCAGAAGCTTCCACCAGGTCCACCGGGCCTTCCTTTCTTCGGAAACCTTCTATCTCTCGACCCAGAACTTCACACTTATTTCGCTGACCTGGCCCAAACCCACGGCCCAATTTTCAAGCTCAGGCTCGGTAGCAAACTCGGAGTCGTTCTATCTTCACCTTCCACGGCGCGTGAAGTGTTAAAAGACCACGACACCGTTTTCGCCAACCGTGACGTCCCTGCCGCCGGTAGAGCCGCCACGTACGGTGGCAAAGATATTGCATGGAGCCCGTATGGACCGGAATGGCGTATGCTGAGAAAAGTCTGCGTAATCAAGATGCTTAGCAACACGACTCTTGACTCCGTTTACGAGCTCCGGCGCGGCGAAGTTCGGAAAACGGTCGGGTCTATTTACAATCGGATCGGGTCAACTGTGGATATTGGGGAGGAAGTTTTTCTGACGGTGTTGAACGTGATTACGAATATGATGTGGGGTGCGACGGTGGAAGGAGAAGAGAGGGTAAGTTTAGGGACGGCGTTTAGGGAGACGGTGGCGGGGATTGTACAGCTATTGGGGAAACCGAATTTGTCGGATTTCTTTCCCGGGTTGGCCCGATTCGATTTGCAAGGTGTGGTGAAAGAGATGAATGTTTTGGCTCCACGTTTTGATAGGATATTTGAAAAGATGATTGGTGAACGTACGAAGAAGGAAGTGGAGgggaaagaaaatgaaagtaaagATTTTCTGCagtttttgttgaatttgaagGATGAAGGTGATTCTAAGACTCCATTCACAATCACCCATGTTAAGGCTCTACTCATGGACATGGTTGTGGGTGGATCAGACACATCCTCCAACACAATTGAGTTTGCACTAGCAGAAATGATGAACAACCCAGAAGTAATGAAGAAAGTTCAAGAGGAGTTAGAAGCTGTGGTTGGCAAAGATAACTTGGTAGAAGAGTCTCACATTCATAAGCTACCCTACTTACATGCAGTGATGAAAGAAACACTTCGTTTGCACCCAGCACTTCCACTTTTAATCCCTCATTGCCCAAGTGAAACCACCAATGTTGGAGGTTACACAATTCCAAAGGGATCTCGTGTGTTTGTGAACGTTTGGGCTATTCATAGAGACCCTTCCATTTGGGAGAAACCACTAGAATTTGATCCTACAAGGTTCTTGGACGGTAAATGGGATTATAGTGgaaatgattttaattattttccatTTGGTTCTGGGAGAAGGATTTGTGCTGGAATAGCAATGGCTGAGAGGACTGTTTTGTACTTCATAGCTACCCTTGTGCACTTGTTTGACTGGACTATACCACAAGGAGAAAAGTCGGAGGTATTAGAGAAATTCGGTATTGTTCTAAAAAAGAAGACTCCTCTGCTCGCCATACCTACACCACGACTTTCCAATCCAGAGCTTTATAAATAG 1554 0.4389 MSSLTNFIKDWFSAADTTTLIVPFLIITTVTWYFYLFFINSKTQKLPPGPPGLPFFGNLLSLDPELHTYFADLAQTHGPIFKLRLGSKLGVVLSSPSTAREVLKDHDTVFANRDVPAAGRAATYGGKDIAWSPYGPEWRMLRKVCVIKMLSNTTLDSVYELRRGEVRKTVGSIYNRIGSTVDIGEEVFLTVLNVITNMMWGATVEGEERVSLGTAFRETVAGIVQLLGKPNLSDFFPGLARFDLQGVVKEMNVLAPRFDRIFEKMIGERTKKEVEGKENESKDFLQFLLNLKDEGDSKTPFTITHVKALLMDMVVGGSDTSSNTIEFALAEMMNNPEVMKKVQEELEAVVGKDNLVEESHIHKLPYLHAVMKETLRLHPALPLLIPHCPSETTNVGGYTIPKGSRVFVNVWAIHRDPSIWEKPLEFDPTRFLDGKWDYSGNDFNYFPFGSGRRICAGIAMAERTVLYFIATLVHLFDWTIPQGEKSEVLEKFGIVLKKKTPLLAIPTPRLSNPELYK 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02462 517 PANTHER OS08G0547900 PROTEIN 10 517 - -
Tsu04g02462 517 Gene3D Cytochrome P450 39 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02462 517 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02462 517 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02462 517 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02462 517 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02462 517 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02462 517 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02462 517 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02462 517 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02462 517 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02462 517 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02462 517 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02462 517 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02462 517 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02462 517 Pfam Cytochrome P450 47 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02462 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Tsu04g02462 517 SUPERFAMILY Cytochrome P450 47 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02462 517 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 10 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02462 Tsu-Chr4 27800345 27804439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02462 16 516 Cytochrome P450 AT4G12300 60.158 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02462 - - gmx:100787507 796.193