Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02445 ATGGGTGGCTGCTTCAGTGCAGAGAGGCACAATCCTTCACATAATGGTAATATAACATTCTTATTCATATTTTCCTTCACATTCTTATTCATATTTTCCTTCAACGTGATACATGGAGATTTCAAAACTTATAATATCTTGCTTGATTATTCTAACCACAACGCAAAACTATCCGATTTTGGGTTGACTAAAATAGATGGGGAAGGTAAAGTTCTCTCAAGATATGTACCACCTGAGTCTCTTAAGACGACAGATCAAACCAAAATGGGTGATGTATACAGTTTTGGAGTTGTTATATTGGAAATTATGTCTGGCAAATGTGCATATGCTAAAAACTGGCCACGATGCGAATACTGTTCAGTTATGCGGGACAAGCCTGGGCCATTACTCATCAACAAACACAAGCTCTTCCAATTTATGGATCCCTATTTAGAAGGCCAATATTCGCCGCGTGAAGCAATGGAAGTTGCTCGCATTGCAATTCAATGTCTGTCTACTAATCCAAACAATAGACCAAACATGGATGAAGTGATGAGATCATTGGAACAACTATAG 555 0.382 MGGCFSAERHNPSHNGNITFLFIFSFTFLFIFSFNVIHGDFKTYNILLDYSNHNAKLSDFGLTKIDGEGKVLSRYVPPESLKTTDQTKMGDVYSFGVVILEIMSGKCAYAKNWPRCEYCSVMRDKPGPLLINKHKLFQFMDPYLEGQYSPREAMEVARIAIQCLSTNPNNRPNMDEVMRSLEQL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02445 184 ProSitePatterns Serine/Threonine protein kinases active-site signature. 36 48 IPR008271 GO:0004672|GO:0006468
Tsu04g02445 184 PANTHER OS01G0588500 PROTEIN-RELATED 27 182 - -
Tsu04g02445 184 Pfam Protein kinase domain 30 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02445 184 ProSiteProfiles Protein kinase domain profile. 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02445 184 SUPERFAMILY Protein kinase-like (PK-like) 30 179 IPR011009 -
Tsu04g02445 184 Gene3D Transferase(Phosphotransferase) domain 1 29 184 - -
Tsu04g02445 184 SMART serkin_6 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02445 184 PANTHER APK1B, PUTATIVE-RELATED 27 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02445 Tsu-Chr4 27596228 27597204 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02445 36 181 Receptor kinase-like Gene Family AT3G58690 42.581 2.44e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu04g02445 Pkinase 2.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02445 - - mtr:MTR_3g067765 162.54