Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02397 ATGTCCTACATATCATCATCTCCAACAGATTTCACCCCAACAAATCTTCAAAAAGTCATTGCGGGTATTATTATAATATCAATTGCCATCGTATTTGTATTAGTTTTCGCAATTGTTTTGGTTCCAAAAATTAATGCCGCCCAGTACCGGTCGGACCATCCGATCGAGTTCAAGATAACTGATGCCTCAATGACGAAGTTCAACCTCACAAGTAACAACATCTTGTATTATAACGTTAATGTCACCATTACAGCAAAAAATTTCGACGACGACGTACAATCTTTGAAAGGAACGATGAAAGTGATTTCTTCGTATAAAGGTAATCAATTACCTTGGGCGACTATAGAACCCTTTCCTCTAGGTAGTAAGAATACTATTACGCTTCAACCCATAGTGTTTGAAGGGAGTCTCATGATCAAATTGAAGCCTAAACAACTTGTTGAATACAATAAGGAGACACAATTGGGAATTTACAACTTAGGTTTGGATTTATCTGAACATCGACATTATTATGATCAAAATATGCATTGTCAAAGGTTGAGAATTCCTTTGATTTCCGATGGTAAGCCTGCACCTACTTTCAATGCCACCACATGTAGGTATATTGATTAA 612 0.366 MSYISSSPTDFTPTNLQKVIAGIIIISIAIVFVLVFAIVLVPKINAAQYRSDHPIEFKITDASMTKFNLTSNNILYYNVNVTITAKNFDDDVQSLKGTMKVISSYKGNQLPWATIEPFPLGSKNTITLQPIVFEGSLMIKLKPKQLVEYNKETQLGIYNLGLDLSEHRHYYDQNMHCQRLRIPLISDGKPAPTFNATTCRYID 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02397 203 PANTHER OS05G0367900 PROTEIN 34 200 IPR044839 GO:0098542
Tsu04g02397 203 PANTHER HARPIN-INDUCED 1 34 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02397 Tsu-Chr4 26887847 26888458 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02397 55 165 SNARE and Associated Proteins AT1G32270 27.928 6.44e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02397 - - gmx:100783747 130.183