Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02396 ATGATATTTAGCTCTAAAGATGAACTTATAGAGCATTACAAGAGATACGGTCAGTCTATGGGTTTTGGAGTTACTAAACGTAGTAGCAAAAATGGAGATGAtgggaaaaaatattttactttagcATGTAGTCGTGGAACAAAGTATGTGAGCAAATCAAACAATCTTTTGAAGCCAAATCCTATAACAAAAACTCAGTGTAAGGCTAGATTGAATGGATGCATTTGTTTAGATGGAACAGTTACTATTTCGAAAATTGTTTTTGAGCATAATCATGACCTAAGTCCTACTAAAGCACGCTATTTTAGAAGTAGTAAGAAGTTGGAGCCTCATTTACAAAGGAAGTTAAAATTCAACGATCAAGCTGGAATAAATGTAAGTAGAAATTTTCGATCTTTGGTTGTTGAAGCGGGTGGATATGAGAATTTGACATTTGGTGAAAAGGATTGTAGAAACTACATAGATAAAGTAAGGAGATTGAGACTTGGGACAGGAGATGCTGATGCGATTCAAAACTATTTTGTTAGAATGCAAAAGCAAAATAGCCAATTCTATTATGTAGTAGACATTGATGATAATAGTCGTCTTCGAAATGTCTTTTGGGCAGATGCAAGATGTAGGGCTGCATATGAATATTTTGGTGAAGTTGTTACATTTGACACAACTTACTTAACAAATAAATATGACATGCCTTTTGCTCCTTTTGTTGGAGTAAATCATCATGGGCAATCTGTATTGTTGGGTTGTGCTTTATTATCGAATGAGGATACTGAAACATTTACTTGGTTGTTTAGAACATGGTTAGATAGCATGCATGGACGTACTCCAAATGCCATAATTACTGATCAAGACAAAGCCATGAAAAATGCAATTGAGGTTGTTTTTCCAAAAGCTCGTCATCGATGGTGTTTGTGGCATATAATGAAAAAGGTTCCAGAAAAGTTAGGTAGACGCCATGATTATGAGTCTATCAAACCACTTTTACATGATGTTGTATATGACTCCTTGAGTAAAAGTGATTTCATGGAAAAGTGGGAAAAAATGATTGAAGATTTTAAACTTCAGGATAATGAATGGTTGAAGGGCTTATTTGATGAAAGAAATCGTTGGGTTCCTGCATTTTTGAGAGACACATTTTGGGCAGGAATGTCAACAACACAAAGAAGCGAAAGTATGAACTCATTTTTTGACGGCTATGTAAATTCAAAGACAACATTGAAGCAGTTTGTTGAACAATATGACAATGCACTaagagataaaattgaaaaggaaaactTGGCTGATTTTGGTTCATTTAATACATCGATAGCTTGTTTAAGTCATTATGGCTTTGAGTCTCAATTTCAGAAAGCTTTCACCAAtgcaaaattcaaagaatttcaAGATGAAGTTGCTTCTATGATTCATTGTCATACTTTCTTTGAGAGATTGGAGGGATTGCATTCTATATATTCTGTTATAGAAAGCAAgaaaaaatttgacaaaataaatgacataatGTTCATGTGGAGGAAGGATATAAGGCGAAGGCATACCCATATTAAATGTGGTTTTGAACATTTTGTTGGAAATGTTGAATTGCAAAGAGTTGATAAAGCTTGTGCTGCCTTTTATGAAGTGGCTTCTAAGGTGATAAATACTGatcatgattttttaaaaatgatgaattGGATCAAGGACATAAAAGACGATTTTACCTCTAAAGAAACATCGCCAAGCATTGTAGAAGATGGTTCAGAACAAAATCAAGTGACTAAAATTCTTGACCCTGTAAAGACTCGAAGTAAAGGTCGTCCTCCTTCGAAAAGGAAGTCTTCTAAAGTTGATCAAATTGTGACGAAACTTGCCCGAAAGAGGACCCAAAtaagaagcaaaaaaaatggaaaatgtcATGGTCAAAAAGAGAACTTGTGTGCACCTAGAGTACAAGAGAGTGTTCAAGTAATTGATGGAATTGACACACAAGAGAGCATTCAATGTGAACAAAGTAGTTTTGGGTGGAATGGACAAGGTGATACAAATAATTTAGCTCCCTTCAATCCAAACTCAGTACTTATTAGTGAAGTAAATCAGGTTCCATTTTATTCTCAAGTCATGAATCATGGTGTTTCCTATTTTGAATTGCTACAGGCACAACACCATGTAAATGATCCGTCATCGTCAACAACACGCGAATCATACAGAGACGAAGTGAATGATTAG 2202 0.3324 MIFSSKDELIEHYKRYGQSMGFGVTKRSSKNGDDGKKYFTLACSRGTKYVSKSNNLLKPNPITKTQCKARLNGCICLDGTVTISKIVFEHNHDLSPTKARYFRSSKKLEPHLQRKLKFNDQAGINVSRNFRSLVVEAGGYENLTFGEKDCRNYIDKVRRLRLGTGDADAIQNYFVRMQKQNSQFYYVVDIDDNSRLRNVFWADARCRAAYEYFGEVVTFDTTYLTNKYDMPFAPFVGVNHHGQSVLLGCALLSNEDTETFTWLFRTWLDSMHGRTPNAIITDQDKAMKNAIEVVFPKARHRWCLWHIMKKVPEKLGRRHDYESIKPLLHDVVYDSLSKSDFMEKWEKMIEDFKLQDNEWLKGLFDERNRWVPAFLRDTFWAGMSTTQRSESMNSFFDGYVNSKTTLKQFVEQYDNALRDKIEKENLADFGSFNTSIACLSHYGFESQFQKAFTNAKFKEFQDEVASMIHCHTFFERLEGLHSIYSVIESKKKFDKINDIMFMWRKDIRRRHTHIKCGFEHFVGNVELQRVDKACAAFYEVASKVINTDHDFLKMMNWIKDIKDDFTSKETSPSIVEDGSEQNQVTKILDPVKTRSKGRPPSKRKSSKVDQIVTKLARKRTQIRSKKNGKCHGQKENLCAPRVQESVQVIDGIDTQESIQCEQSSFGWNGQGDTNNLAPFNPNSVLISEVNQVPFYSQVMNHGVSYFELLQAQHHVNDPSSSTTRESYRDEVND 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02396 733 Pfam MULE transposase domain 216 310 IPR018289 -
Tsu04g02396 733 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 618 IPR031052 GO:0006355
Tsu04g02396 733 MobiDBLite consensus disorder prediction 591 610 - -
Tsu04g02396 733 Pfam FAR1 DNA-binding domain 12 95 IPR004330 -
Tsu04g02396 733 MobiDBLite consensus disorder prediction 590 610 - -
Tsu04g02396 733 PANTHER OS03G0843700 PROTEIN 1 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02396 Tsu-Chr4 26877192 26879875 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu04g02396 MULE 4.4e-37 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02396 - - cam:101506732 891.723