Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02370 aTGAGGAATTCAGAGATTATGAAAGATGTGGTTATAATTGGTGGATTAATTGCTACACAATTTGTTTATGCTGGAAATGCTATGCTCATGAGTTATCTTATGTCTTTGGGTTTACAATGTTTTACCATTGTTATTTACACTTCCTTTGCTACATTTCTAATTCTCCTTCCCTTTGCTCTTTATTTTGAAAGGGGTAAATGGCCCAAGAGAATcagtttcaagttgattgtaCAATTTCTCCTCCTTGCTCTTGGAGGTGTAACTCTGTTCCAATCATTATTCCTTAAGGGAATCAATCTAACCTCAGCAGCAATGGGAACAGCCATGCCAAACCTTGCACCGGGAATTATCTTCATCATCGCGTGGACTTTTCGGTTGGAAAAAGTGGACTTAAAGTGCACATATAGTAGAGTAAAAATAACTGGCACATTACTTTGTGTCTTAGGGGCATTCACAATGAGCTTAATGCAAAGTATCTCAATTTCTTTACCAATTGAAGGGTTAAAAGTTCAATTAACAAATCCACTACCACCAATTGTAATGTTTGATAGAGACAAGATAATTGGTTGCCTCTATCTCTTGGCTTCAATCCTTGTTCTCTCAATCGTCGTTGTTCTACAGgctTTTACTCTAGGAGAATTTCCTGCACCAATGTCTTTGAGTGCAATAACATCATTTTTTGGAGGGTTGATCACTACAGCAGCTCAATTAATTGAATATCATGAAATTAAAACTGGGTGGCCACTAGTTAGTGCTGGTGACATGATTGGCTATTCTGTTCTGTCAGGTGCAGTAAATGGAATAGGCTTAAGCTTCAGTGCTTGGGCACTTGAGAAGAGAGGGCCGGTTTTCGTATCTATGTTCGGTCCTGTTGGCACAGTTTGCTCTGTCATTTTCTCTATTGTTACTTTAGGAGATAGTACAGTTAATATTGGAAGTATATCGGGTATGTTTCTGATGTTCACTGGGCTCTACTTTGTGCTTTGGGCCAAAGGAAAAGAAGATGGTTTAGAGAGTGAGTTAGATGCAGAGAAGCTGCCTCTCTTAAGTTGA 1053 0.3799 MRNSEIMKDVVIIGGLIATQFVYAGNAMLMSYLMSLGLQCFTIVIYTSFATFLILLPFALYFERGKWPKRISFKLIVQFLLLALGGVTLFQSLFLKGINLTSAAMGTAMPNLAPGIIFIIAWTFRLEKVDLKCTYSRVKITGTLLCVLGAFTMSLMQSISISLPIEGLKVQLTNPLPPIVMFDRDKIIGCLYLLASILVLSIVVVLQAFTLGEFPAPMSLSAITSFFGGLITTAAQLIEYHEIKTGWPLVSAGDMIGYSVLSGAVNGIGLSFSAWALEKRGPVFVSMFGPVGTVCSVIFSIVTLGDSTVNIGSISGMFLMFTGLYFVLWAKGKEDGLESELDAEKLPLLS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02370 350 Pfam EamA-like transporter family 16 154 IPR000620 GO:0016020|GO:0016021
Tsu04g02370 350 PANTHER OS11G0588100 PROTEIN 10 345 - -
Tsu04g02370 350 PANTHER WAT1-RELATED PROTEIN 10 345 IPR030184 GO:0016021|GO:0022857
Tsu04g02370 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02370 Tsu-Chr4 26533695 26536862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02370 3 340 Nodulin-like Gene Family AT5G47470 58.997 6.70e-135 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02370 - - mtr:MTR_4g100840 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00390 05 2918613 2921414 Tsu04g02370 04 26533695 26536862 PCT