Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02307 ATGCGGTTCGACACGGCGGTGACAGCGGTTGAAGGCGGTGGTGATATTGGAGATCGCGCACGGTGTGGGAGGACCAACGACGGGAGAGAGAGTTCAAGTATACCTGCGGATTTGTTTCCTCAGCAAAATCCGCAGGGGTGTGATGGTTCTTTGTTGCTTGATGATACACCAACAATGCTTGGAGAAAAATTGGCcctttcaaatataaattctGTTATATCATTTGAAGTTGTTGATGAAATTAAAGAAGCTTTAGAGAAGGCTTGCCCTGGAATTGTTTCTTGTGCTGATATCATTATCATGGCTTCTAGAGATGCTATAGCACtgGAGGACCAGATTAGCAGGCTATACAATCAATCGGGCAGTGGAAAGCCTGACCCTGCATTCAATCCCGGTTTTAGACAAGAGCTTGAAAAGCAATGTCCACTAGATATTGATCAAAATAAGACATTGAACCTTGATGCAACTCCGGTGATTTTtgataatcaatatttcaaGGATTTGGTTGGTGGAAAAGGATTTCTTAACTCTGATCAAACACTTTTCACATAG 552 0.4094 MRFDTAVTAVEGGGDIGDRARCGRTNDGRESSSIPADLFPQQNPQGCDGSLLLDDTPTMLGEKLALSNINSVISFEVVDEIKEALEKACPGIVSCADIIIMASRDAIALEDQISRLYNQSGSGKPDPAFNPGFRQELEKQCPLDIDQNKTLNLDATPVIFDNQYFKDLVGGKGFLNSDQTLFT 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02307 183 SUPERFAMILY Heme-dependent peroxidases 45 183 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu04g02307 183 PANTHER PEROXIDASE 72-RELATED 114 182 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g02307 183 MobiDBLite consensus disorder prediction 18 40 - -
Tsu04g02307 183 Pfam Peroxidase 45 109 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g02307 183 Pfam Peroxidase 113 182 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g02307 183 PRINTS Plant peroxidase signature 33 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g02307 183 PRINTS Plant peroxidase signature 92 102 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g02307 183 PRINTS Plant peroxidase signature 73 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g02307 183 ProSiteProfiles Plant heme peroxidase family profile. 45 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g02307 183 ProSiteProfiles Plant heme peroxidase family profile. 135 183 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g02307 183 PANTHER PEROXIDASE 17 45 109 - -
Tsu04g02307 183 PANTHER PEROXIDASE 17 114 182 - -
Tsu04g02307 183 PANTHER PEROXIDASE 72-RELATED 45 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g02307 183 PRINTS Haem peroxidase superfamily signature 153 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g02307 183 PRINTS Haem peroxidase superfamily signature 93 110 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g02307 183 Gene3D Peroxidase, domain 2 114 183 - -
Tsu04g02307 183 Gene3D - 45 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02307 Tsu-Chr4 25722133 25724779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02307 115 183 Peroxidase AT2G22420 72.464 2.23e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02307 K00430 - aof:109833972 172.94