Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02304 ATGGAAGAAAGATATGAGCCATTAAAGGAACTTGGTTCTGGAAATTTTGGTGTTGCTAGGTTGGCTAAAGACAAAAAAACTGGTGAACTTGTTGCTCTCAAATACATAGAGAGGGgcaaaaagATTGATGAGAATGTCCAAAGGGAGATAATGAATCACAGATCATTAAGGCATCCTAATATTGTGAGGTTCAAAGAGGTCTTGCTGACCCCTTCGCATTTAGCCATTGTCTTGGAGTATGCTGCCGGTGGTGAACTCTTCGAGAGGATATGCACTGCTGGTCGATTTAGTGAAGACGAGGCAAGATATTTCTTCCAACAGCTACTTTCTGGCGTTAGCTACTGTCATTCAATGGAAATTTGTCATAGAGATCTGAAATTGGAAAACACTCTCTTGGACGGAAATCCATCCCCTCGGCTTAAAATTTGCGACTTTGGTTACTCCAAGTCTGGAATACTGCACTCTCAACCGAAGTCAACAGTTGGAACTCCTGCTTACATTGCTCCCGAGGTTCTGTCAAGAAAGGAGTATGACGGAAAGATTGCAGATGTTTGGTCTTGTGGTGTGACTCTATATGTAATGCTAGTTGGTGCATATCCATTTGAAGATCCAGAAGATCCTAGAAATTTCAGAAAGACTATTGGGAGAATAATAGGTGTTCAATACTCCATACCCGACTATGTACGCATTTCTGCAGATTGTAGGAATCTTCTATCTCGCATCTTTGTTGCCGATCCTGCCAAGAGGATCACAATCCCAGAGATAAAACAGAACCCTTGGTTTTTGAAGAATATGCCTAAAGAGATAATTGAAGCTGAAAGAAAAGGTTATGTGGAAACAAAGAAAGACCAACTAAGCCAAAGTGTAGAAGAAATCATGAGGATCATACAAGAGGCGAGGGTACCGGGACAAGGATCTAAAGCTGGCGATGATGGTCTAGCTGACACCGGTTCAATGAACATTGAAGACGACGAGGAAGTTGATGTCAGCGGTGACTATGAAAACGTGTGA 1011 0.4174 MEERYEPLKELGSGNFGVARLAKDKKTGELVALKYIERGKKIDENVQREIMNHRSLRHPNIVRFKEVLLTPSHLAIVLEYAAGGELFERICTAGRFSEDEARYFFQQLLSGVSYCHSMEICHRDLKLENTLLDGNPSPRLKICDFGYSKSGILHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIGRIIGVQYSIPDYVRISADCRNLLSRIFVADPAKRITIPEIKQNPWFLKNMPKEIIEAERKGYVETKKDQLSQSVEEIMRIIQEARVPGQGSKAGDDGLADTGSMNIEDDEEVDVSGDYENV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02304 336 MobiDBLite consensus disorder prediction 317 336 - -
Tsu04g02304 336 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 3 331 - -
Tsu04g02304 336 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02304 336 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02304 336 CDD STKc_SnRK2 4 260 - -
Tsu04g02304 336 Gene3D Transferase(Phosphotransferase) domain 1 81 268 - -
Tsu04g02304 336 PANTHER SERINE/THREONINE KINASE 3 331 - -
Tsu04g02304 336 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Tsu04g02304 336 MobiDBLite consensus disorder prediction 300 336 - -
Tsu04g02304 336 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Tsu04g02304 336 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02304 336 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Tsu04g02304 336 SUPERFAMILY Protein kinase-like (PK-like) 3 269 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02304 Tsu-Chr4 25700048 25703038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02304 4 274 CBL-interacting serine-threonine protein kinases AT4G24400 43.369 1.09e-71 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Tsu04g02304 Pkinase 4.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02304 K14498 - gmx:100817713 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00431 05 3248717 3258579 Tsu04g02304 04 25700048 25703038 PCT