Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02181 ATGAaatctcatcatcattatcatcataattatcattatcatttcttttttatcataatcATATCATTATTCTCTCTAACTTCACTCACTCCACTCCCTAACAGAAGAATCTTACACGAACCGTTATTAATTCCGGTCAGTTCTGCTCCGCCGCCGGAATTATATCCGCCTCCTCCAGACATTACTCCTCCGTCACCTGACATTCCGTTTTTTAATGAATCTCCAACCGGACCACCGCCTCCGGTGGTGGTTAACAATAATCCAAATCTACCGTCGCCGTCAGTTGCTAACTTCACAATTGCAAATCCAACGGCGACGAAACCTACTAAACCTGCTAAGAAAGTTGCAATTGCGGTTTCAGTGGCATTTTCGATATTTGTTATGTTTTCTATTGTAGCTTTCTTCTTGTTTAAGTATAGAATGAAGAAACACTCGTCGGAATCAGATAAACGGAAACTCATCGGTGAGAATTTGAATAGAGTTCTAGAAGATTCCACGCGAGCCTCActatcaccaccaccaccaccatcatcatcatcatcaagttTTCTCTACATTGGAACTGTGGTAGAGCCTAACGGAACTCCGGTAGGTGTAACCAATCCTCATAAGGCTACTCGTTACCGGCAGAGTCCTGAGTTACATCCATTGCCGCCGCTTACGAAGTCTCTCGTCGTCGATTCTCACTCTCCACCGGCGGTGTCTTCAACGTCGTCGTCTGATAACGATGAAAGTCGCGAAACGGCGTTTCATTCGCCGGTTTCTCGTCAAAGCTCTCTAGCAAACGGAAGTCCAACCGCGTCAGTTGCGGTAACTACGGTGGTTCCTTTTTCAAAGAGAACTTCGCCGAAATCTCGATTTTCTAGTTCTCCGCCGGTGATGATACCACCGATAAGTGGTAGTGGTGGTGGTTCTTCTAGAAGGCCGAAATTCTCATCGCCGCCACCCGCGCCGAATTTGACGCATCTTCATTCAAATGACTCAATGGCTTCACTTAACCTtcctcctcctccaccaccTCCGCCGTTACCGAGAAATGGTTGGTCGCCGGTGGTTAGTGCACAATCTTCCTCTGTTTTAAGGAAGCATCAACGATCTCATTCTTCAATTCATGAATCAGATTCTGCATCTGGTAACAGTTTGAATGTGAAGAAAGCTTTGgaaaaagaagatgatgaaattGAAATGGATGAAGGAAATGGAAAACCTAAATTGAAAGCTCTTCATTGGGATAAAGTGCGTGCTACTTCAGATCGTGCTACTGTTTGGGACCAATTAAAATCAAGCTCATTTCaGTTAAATGAGGATATGATGGAGACACTGTTTGGTTGTAATTCATCAAATACTGCACCTAAAGCTAAAGAGATGTCTGTTACCAGGAAACCGGTTTTTGCTACTGTTGAAAATGAGAGTAGGGTGTTAGACCCTAAGAAATCACAGAATATAGCTATATTACTCAGGGCATTGAATGTCACAAGAGATGAAGTTTCTGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTAGGCGCTGAGTTATTTGAAACTCTAGTGAAGATGGCTCCTACAAAGGAGGAGgagataaaactaaaaaattatgatgGTGACCTTTCAAAACTTGGGCCTGCAGAAAGATTTCTTAAGCAAGTGCTTGATATCCCTTTAGCTTTTAAAAGAGTTGAAGCCATGTTGTACAGAGCTAATTTTGAAACAGAAGTTAACTACCTTAAGAAATCCTTTCAATCCCTCGAGGCAGCAAGTGAGGAATTAAAGAACAGCCGCTTATTCCTCAAACTCCTTGAAGCCGTTCTCAGGACAGGAAACAGAATGAATGTTGGAACCAATCGTGGCGGTGCTAAATCTTTCAAACTGGACACACTCTTGAAACTTGCAGATATAAAAGGAACAGATGGCAAGACAACATTGCTCCATTTTGTTGTGCAAGAGATTATTAGATCTGAAGGTACAGGTGCTGAATCCACAAATGAGAATgttcaaaaccaaacaaatccCCAGTTCAATGAGGATGAGTTCAGAAAGAAGGGATTGCAGGTTGTGGCTGGATTGAGTAGAGACTTTGGTAATGTCAAAAAGGCGGCAGGAATGGATTCGGATGTCTTAAGCAGCTATGTCATAAAGCTTGAAATGGGGCTTGATAAAGTGAGATTGGTTTTGCAATATGTAAAACCAGATATGCAAGGAAACTTCTTTAACTCAACagagatatttttgaaagatgctgaagagaaaatattaaagatCAAAGCTGATGAGATAAGGGCCTTATTCCTTGTGAAAGAAGTTACAGAATACTTTCATGGGGATACAACAAAGGAAGAAGCTCACCcttttagaatttttatgattgtaagaGACTTTCTAAATATTTTGGATCAAGTATGCAAAGAAGTGGGAAGAATGCAGGATAGAACTTCAATCGGTTCAACCAGATCGTTCAGAATAGCTGCAAATGCATCGTTACCTGTTCTCAACAGGTACCGTGCAAGACAAGAGACAAGTTCAGATGACGAAAGTTTATCACCTTAG 2544 0.3856 MKSHHHYHHNYHYHFFFIIIISLFSLTSLTPLPNRRILHEPLLIPVSSAPPPELYPPPPDITPPSPDIPFFNESPTGPPPPVVVNNNPNLPSPSVANFTIANPTATKPTKPAKKVAIAVSVAFSIFVMFSIVAFFLFKYRMKKHSSESDKRKLIGENLNRVLEDSTRASLSPPPPPSSSSSSFLYIGTVVEPNGTPVGVTNPHKATRYRQSPELHPLPPLTKSLVVDSHSPPAVSSTSSSDNDESRETAFHSPVSRQSSLANGSPTASVAVTTVVPFSKRTSPKSRFSSSPPVMIPPISGSGGGSSRRPKFSSPPPAPNLTHLHSNDSMASLNLPPPPPPPPLPRNGWSPVVSAQSSSVLRKHQRSHSSIHESDSASGNSLNVKKALEKEDDEIEMDEGNGKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGCNSSNTAPKAKEMSVTRKPVFATVENESRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGAELFETLVKMAPTKEEEIKLKNYDGDLSKLGPAERFLKQVLDIPLAFKRVEAMLYRANFETEVNYLKKSFQSLEAASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGGAKSFKLDTLLKLADIKGTDGKTTLLHFVVQEIIRSEGTGAESTNENVQNQTNPQFNEDEFRKKGLQVVAGLSRDFGNVKKAAGMDSDVLSSYVIKLEMGLDKVRLVLQYVKPDMQGNFFNSTEIFLKDAEEKILKIKADEIRALFLVKEVTEYFHGDTTKEEAHPFRIFMIVRDFLNILDQVCKEVGRMQDRTSIGSTRSFRIAANASLPVLNRYRARQETSSDDESLSP 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02181 847 Gene3D Formin, FH2 domain 403 821 IPR042201 -
Tsu04g02181 847 MobiDBLite consensus disorder prediction 251 295 - -
Tsu04g02181 847 MobiDBLite consensus disorder prediction 208 382 - -
Tsu04g02181 847 ProSiteProfiles Formin homology-2 (FH2) domain profile. 395 822 IPR015425 -
Tsu04g02181 847 SMART it6_source 395 811 IPR015425 -
Tsu04g02181 847 PANTHER FORMIN-LIKE PROTEIN 6 15 847 - -
Tsu04g02181 847 SUPERFAMILY Formin homology 2 domain (FH2 domain) 335 808 - -
Tsu04g02181 847 MobiDBLite consensus disorder prediction 228 243 - -
Tsu04g02181 847 MobiDBLite consensus disorder prediction 349 363 - -
Tsu04g02181 847 Pfam Formin Homology 2 Domain 399 796 IPR015425 -
Tsu04g02181 847 PANTHER FORMIN-RELATED 15 847 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Tsu04g02181 847 MobiDBLite consensus disorder prediction 332 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02181 Tsu-Chr4 24141750 24146042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02181 369 837 FH2 protein (formin) Gene Family AT5G67470 69.492 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02181 - - gmx:100803578 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02181 04 24141750 24146042 Tsu04g02181 04 24141750 24146042 ECH
Tsu05g00538 05 4388908 4393819 Tsu04g02181 04 24141750 24146042 PCT