Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02180 ATGGCTGTAGTTGATTTTAATAGTACTATTGTTGTGAATGTGAGAGAGTTTGATccaaataaagataaagaaagTGTTGAAGCTGTTGAAAAAATATGTGAAGTTGGTCCCAATGGAAAACTTTCTCTCTTCACCGACCTCCATGGTGACCCTATTTGCAGGGTCCGCAACTCACCAACTTTCCTCATGCTGgTAGCAGAGATAGACAATGAGATAGTTGGAATGATAAGAGGCTGTATCAAAACCGTTACATGCGGCAAAAAATTAACAAGATCAACAAAAACCACAAATGAACCAAATTCCAATCATGTCCCTGTCTTCACAAAACTAGCCTACATACTAGGTCTTCGTGTTTCACCAAATCACAGAAGAATGAGAATAGGTttaaaacttgttcaaaaaatggaaCAATGGTTCAGAGAAAATGGTGCTGAGTATTCATACATGGCAACTGAAAACGACAACGTTGCATCCGTTAATCTTTTCACCGACAAATGCGGTTACTCTAAATTCCGTACACCTTCAATTCTCGTTAACCCTGTTTTCGCTCACCCTGTCAAAACGTCGTCGTCTAAAGTAACCATCATTAAACTAAACCCAAACGACGCTGAATTGATTTACCGTAACAAATTCTCCACCACTGAGTTTTTTCCTCGTGACATTGATTCCGTTTTGAAAAACAAACTCACTCTTGGTACTTTTCTCGCTATTCCAAAAAATGGGCCTGGATCTGGATTTCGGcccaataataataacaactggTCTGGCCCAGTATCTTTTTTAATGGACCCACCTAGTTCTTGGGCTTTAATTAGTGTTTGGAACTGTAAAGATTTGTTCACTCTTGAAGTAAAAGGCGCGTCGCGCGTGAGACGGTTATTGGCTAAAACAACGCGCGTGATAGATAAAGCTTTTCCTTGGTTACGGTTACCATCGATTCCGAATTTTTTTGAACCGTTTGGATTTCATTTAATGTATGGAATTGGAGGGGAAGGACCGGAGGTATTGAAAATGGTGAAAGCTTTGTGTGGTTTTGCTCATAATCTTGCTATGGAAAATGGTTGTAGTGCTGTTGCTACTGAAGTTTCGAACTGTGATCCTCTACGGTTCGGTATTCCTCATTGGAAAGCTTTGTCTTGTGAAGAGGATTTGTGGTGTATTAAGAGATTAGGAGAGGATTATAGTGATGGTTCTGTTGGTGATTGGACTAAATCTAAACCTGGATTCTCCATTTTTGTTGATCCTAGAGAGTtttaa 1257 0.3795 MAVVDFNSTIVVNVREFDPNKDKESVEAVEKICEVGPNGKLSLFTDLHGDPICRVRNSPTFLMLVAEIDNEIVGMIRGCIKTVTCGKKLTRSTKTTNEPNSNHVPVFTKLAYILGLRVSPNHRRMRIGLKLVQKMEQWFRENGAEYSYMATENDNVASVNLFTDKCGYSKFRTPSILVNPVFAHPVKTSSSKVTIIKLNPNDAELIYRNKFSTTEFFPRDIDSVLKNKLTLGTFLAIPKNGPGSGFRPNNNNNWSGPVSFLMDPPSSWALISVWNCKDLFTLEVKGASRVRRLLAKTTRVIDKAFPWLRLPSIPNFFEPFGFHLMYGIGGEGPEVLKMVKALCGFAHNLAMENGCSAVATEVSNCDPLRFGIPHWKALSCEEDLWCIKRLGEDYSDGSVGDWTKSKPGFSIFVDPREF 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02180 418 CDD NAT_SF 63 146 - -
Tsu04g02180 418 Pfam Acetyltransferase (GNAT) family 56 168 IPR000182 GO:0016407
Tsu04g02180 418 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 187 IPR000182 GO:0016407
Tsu04g02180 418 PANTHER N-ACETYLTRANSFERASE 7 418 - -
Tsu04g02180 418 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 7 418 - -
Tsu04g02180 418 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 58 173 IPR016181 -
Tsu04g02180 418 Gene3D - 42 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02180 Tsu-Chr4 24115872 24117303 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Tsu04g02180 Acetyltransf_1 1.3e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02180 - - gmx:100775317 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02180 04 24115872 24117303 Tsu04g02180 04 24115872 24117303 ECH
Tsu05g00542 05 4429702 4431343 Tsu04g02180 04 24115872 24117303 PCT