Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02171 ATGTGTCCTAGAAATGTTGATCCAAGAATAGCCATCAATATGGACCCAACAACTCCTAGACAATTTGACAATGCTTATTACCAAAACCTTCAACAAGGAAAAGGTTTATTTACTTCTGATCAAATTCTCTTCACGGATGCAAGATCTAGGGCTACGGTTAATTCTTTTGCTTCTAGTGGTAACGTTTTCAATGCAAATTTTGTCGCTGCCATGACTAAATTGGGTCGCATTGGAGTTAAAACTGCAAGAAACGGGAAAATCCGTACTGATTGTTCTGTTCTTTAA 285 0.3754 MCPRNVDPRIAINMDPTTPRQFDNAYYQNLQQGKGLFTSDQILFTDARSRATVNSFASSGNVFNANFVAAMTKLGRIGVKTARNGKIRTDCSVL 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02171 94 PANTHER - 1 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g02171 94 Gene3D Peroxidase, domain 2 2 74 - -
Tsu04g02171 94 Pfam Peroxidase 7 59 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g02171 94 SUPERFAMILY Heme-dependent peroxidases 1 93 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu04g02171 94 ProSiteProfiles Plant heme peroxidase family profile. 1 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu04g02171 94 PRINTS Plant peroxidase signature 13 28 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g02171 94 PRINTS Plant peroxidase signature 29 46 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g02171 94 PRINTS Plant peroxidase signature 69 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu04g02171 94 Gene3D - 75 93 - -
Tsu04g02171 94 PANTHER PEROXIDASE 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02171 Tsu-Chr4 23972120 23972404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02171 2 91 Peroxidase AT5G67400 74.444 1.02e-45 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02171 K00430 - gmx:100819937 180.644