Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02164 ATGGCAATTCAATATTACTCTATCCTTTTActtacttttcttcttcaattctctACACTACAATTCCCCTCGCTTGCATATGATCACCAAAACACATACTTCATCAATTGCGGCTCATATATCAATGTTAATGAAAGTAACAATCTTTATATTGGTGAATCAAATCCTACTTACCCTCGAACAAATTTCAAGAAAAGTTCCGTAGAAACCAATCAATCATCAGTGCCTTCACCTCTCTACGAAACAGCAAGAATTTTCCATTCTGAATCTTCCTATGGATTTAATACTGAGCCAAACAACACCTACATGGTACGTTTACACTTCTTTTCATTTGCTTCACCAACTAACATTTCCACGGCAAAATTCAACGTTTCCGTTCCAGGTTTCTCTCTGTTACAAAACTTCGATGCAGAAAACACCACAAACCCTGGCTTAATAAAAGAGTATTTCGTTAAAATCATCCGTAAAAGATTCAAAATCACTTTCACACCTCAAAATTCATCATTCGCGTTTGTTAATGCCATAGAACTCTTTATGCTCCCCATACATTTAATCTCCGATTCAGTCGCACGTTTCACTTACACCGGTCGAGGCTTATCTACTTACAGTGGCAGTTTACTGTCACGAGCTTTGGAAACCAAACACCGTCTTAATGTTGGTGGTGAAACTGTCTCTGGAGAAAACGATAACTTCTCAAGAAAATGGTTACCAGATGACAGTTATATAACTGATCCACAAAATGCTAAGAATAGTCCCTATTTTGGAGGTACAATTAAACGCAATGcagatgatgaatctgatggtccATATTCAAATCAATATACTGCTCCAGGTGTTGTTTATCAAACTGCCAAAGAGAGTAAAAACGGTTCTAATGGTTTAGGTATAAGTTGGACTGTTCCTGTGGAGAAAAATACAGATCATTTCCTTAGGCTTCACTTTTGTGACATTTTTAATCAACAGAGTCTACTTACAATCTTCATTCTCAACATTTATGACCAGATTGTTATTTCAGATGTAAATAGTGGCATAGATGTGTCTACTccttattattatgattttgtgGTTCATTCGGATGGCTCTGGGCTATTGAATGTTAGTGTGGTACCTAATACAACAGTTGCTAAACCGAACGCGTTTTTAAACGGGCTAGAACTAATGAAAGTGATCGGATTGTCCAGTTCAATTCCCCCAGATGATTTGGATTCGAAGAAGATTAGTCTTCCTGCGGTGGTGGGTTGGGTCGTTGGAGGTTTAGTGTTGGTTTCTGTTGTGGTGGTTTTGTTTATTTGGATTAGTAAAATTAGGAAACAAAAGCATGTTGAAAATTCCAATATTGTGAAGATTCCAACTACTGCAAGAGGGTTTTCTCATAGCAGAAAAACAACTCAAGGCTCCACTTTACCTAACATAAACCTTGGCCTGAAAATCTCCTTGATTGATCTTCAATTTGCAACAGAGAATTTCGATGTGAAGAGGATAATTGGAATTGGTGGTTTTGGAAATGTTTATAAGGGAGTTCTCAAGAATGGAATGAGTGTTGCAGTGAAAAGAAGTGTGACTGGGTCTGGTCAAGGATTTCCTGAATTTCAAACCGAGATAATGATTTTGTCCAAGATTCGTCACATACATCTTGTTTCCTTAATCGGGTATTGTGATGAAAGAGATGAGATGATACTTGTTTATGAATACATGGAAAATGGGACACTTAGAGAGAATTTGTACAATACAAATTTGCCTTGCTTGACATGGAAGCAAAGGCTTGAGATTTGTATTGGTGCTGCTAAAGGTCTTCATTATCTTCACAAAGGAGTATCTGGTGGAATAATTCATCGTGATGTGAAATCCAGCAATATATTGCTTGATGAGAATCTTGTAGCTAAAGTTGCTGATTTTGGTCTTTCAAGGACAGGTCCTCTTGATCAACATTCTTATGTCAGCACATGTGTTAAAGGAACTTTTGGGTATCTTGATCCTGATTACTTTAGAACACAACATCTTACCGAAAAATCTGATGTTTATTCTTTTGGGGTGGTTCTACTTGAAGTGTTGTGTGCAAGACCAGCCATTGATCTGTCTTGTCCAAATGAGCAAGTCAATTTGGCTGAGTGGGGATTGCTTTGCAAAGAAAAAGGAATACTTGAAGAGATCATTGTTCCTTCCATCATGAGACAAATTAATCTAAACTCACTTAGAATATTTAGTGAGACTGTAGAAAAATGCTTACAGGATTATGGTTGTGATAGGCCAACAATGGTTGATGTGTTGTGGGACTTGGAATATGCTTTGCAACTTCAGATAGAACCACATGAGGATAGTTCTAGCAGTGCTTTTCTATCACTTCAATTGCCTAATGTTCAAGATTTACCTTGTATGTCTACACTGATTGAAGTGGATGGCATGTCTATTGGGAGGGTCGATGAATTTGAAACTACAACGTCTATGATGTTAGATAGAGTTTCATGTGAAGGAAATCAAGGCACAACGATCAACATGTTTGATTTGGAAAGGAGAATAGCCATGCAATTAGGACAAGCTGTTTTGGATGAACAGCAACGTCTTCACGACAACATGGATGGCACTGGCAGCGTAGCTTCAGAATCGCTTTTGACACCTGACAAGAGGAATGTATACTCATCCGAGCTTTACCCGGCTTCTAATGAGGTTTCCAATCCATTAAATGTTTCTTCACCTTCAGCTGATAAGCCTCCTTTGCCGAGAAAATCATTCCTAAACTCAGTTTCCAGAAAACTTGGTCGTCTTTCTCCTTTTTCCCGTGCTAGTCCTGGCATAACGCCGTTGAAAGATCGCCTAAAACAAGACATGGTTTGA 2832 0.3736 MAIQYYSILLLTFLLQFSTLQFPSLAYDHQNTYFINCGSYINVNESNNLYIGESNPTYPRTNFKKSSVETNQSSVPSPLYETARIFHSESSYGFNTEPNNTYMVRLHFFSFASPTNISTAKFNVSVPGFSLLQNFDAENTTNPGLIKEYFVKIIRKRFKITFTPQNSSFAFVNAIELFMLPIHLISDSVARFTYTGRGLSTYSGSLLSRALETKHRLNVGGETVSGENDNFSRKWLPDDSYITDPQNAKNSPYFGGTIKRNADDESDGPYSNQYTAPGVVYQTAKESKNGSNGLGISWTVPVEKNTDHFLRLHFCDIFNQQSLLTIFILNIYDQIVISDVNSGIDVSTPYYYDFVVHSDGSGLLNVSVVPNTTVAKPNAFLNGLELMKVIGLSSSIPPDDLDSKKISLPAVVGWVVGGLVLVSVVVVLFIWISKIRKQKHVENSNIVKIPTTARGFSHSRKTTQGSTLPNINLGLKISLIDLQFATENFDVKRIIGIGGFGNVYKGVLKNGMSVAVKRSVTGSGQGFPEFQTEIMILSKIRHIHLVSLIGYCDERDEMILVYEYMENGTLRENLYNTNLPCLTWKQRLEICIGAAKGLHYLHKGVSGGIIHRDVKSSNILLDENLVAKVADFGLSRTGPLDQHSYVSTCVKGTFGYLDPDYFRTQHLTEKSDVYSFGVVLLEVLCARPAIDLSCPNEQVNLAEWGLLCKEKGILEEIIVPSIMRQINLNSLRIFSETVEKCLQDYGCDRPTMVDVLWDLEYALQLQIEPHEDSSSSAFLSLQLPNVQDLPCMSTLIEVDGMSIGRVDEFETTTSMMLDRVSCEGNQGTTINMFDLERRIAMQLGQAVLDEQQRLHDNMDGTGSVASESLLTPDKRNVYSSELYPASNEVSNPLNVSSPSADKPPLPRKSFLNSVSRKLGRLSPFSRASPGITPLKDRLKQDMV 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02164 943 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Tsu04g02164 943 CDD STKc_IRAK 495 760 - -
Tsu04g02164 943 MobiDBLite consensus disorder prediction 887 909 - -
Tsu04g02164 943 PANTHER BNAC03G27170D PROTEIN 24 787 - -
Tsu04g02164 943 Pfam Malectin-like domain 63 389 IPR024788 -
Tsu04g02164 943 PANTHER OS07G0166700 PROTEIN 24 787 IPR045272 GO:0004714|GO:0006468
Tsu04g02164 943 Pfam Protein tyrosine and serine/threonine kinase 491 688 IPR001245 GO:0004672|GO:0006468
Tsu04g02164 943 SUPERFAMILY Protein kinase-like (PK-like) 469 760 IPR011009 -
Tsu04g02164 943 ProSitePatterns Protein kinases ATP-binding region signature. 495 517 IPR017441 GO:0005524
Tsu04g02164 943 SMART serkin_6 489 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02164 943 ProSiteProfiles Protein kinase domain profile. 489 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02164 943 Gene3D - 27 180 - -
Tsu04g02164 943 Gene3D - 210 390 - -
Tsu04g02164 943 Gene3D Phosphorylase Kinase; domain 1 447 564 - -
Tsu04g02164 943 Gene3D Transferase(Phosphotransferase) domain 1 565 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02164 Tsu-Chr4 23868407 23871850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02164 5 776 Receptor kinase-like Gene Family AT2G23200 43.267 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu04g02164 Malectin_like 1.2e-29 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02164 - - mtr:MTR_4g095032 1134.01