Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02158 ATGGGGTTTTCTTTTTCGTTTCACAAATCTTTTCCTATAGTTCTGTTGGTTTTGTTAATGGGTCTATGTGATGCATCTTCTTCTTTGAAGAAAACTTACATAGTGCACGTTGCAAAATCTGAAATGCCGGAGAGTTTTGAGCACCATACTTTATGGTATGAATCTTCTTTACAATCTGCATCTGAATCAGCTGAAATGATGTACACTTATGAAAACGCGATTCATGGTTTCTCAACCAGATTAACTGATGAAGAAGCGCGTTTGCTTGAGAGCCAAACAGGGATTTTAGCTGTTTGGCCTGAAGTGAAATATGAACTTCATACAACAAGAACTCCTCAGTTTCTTGGCCTCGATAAAACCGCTGACATGTTCCCAGCATCAAGCTCAGGAAGCGATGTTGTCGTCGGTGTTCTTGATACCGGTGTTTGGCCTGAAAGCAAGAGCTTTGACGACACTGGATTTGGTCCTATACCCACAACATGGAAAGGCGCGTGTGAATCAGGTACAAACTTCACAGCTTCAAACTGTAACAAAAAACTGATCGGAGCAAGATATTTCTCAAAAGGTGCTGAAGCCATGTTAGGTCCTATCGACGAAACAACAGAATCCAAATCTCCACGAGACGACGACGGCCATGGCACACACACTTCAACAACAGCAGCAGGATCAGTCGTTTCCGGAGCCAGTCTCTTCGGCTACGCTTCCGGAACAGCGCGTGGGATGGCCACGCGCGCTAGAGTTGCAGCTTACAAAGTTTGTTGGAAAGGTGGTTGTTTCAGTTCAGACATTTTAGCAGCCATTGATAAAGCTATTTCAGATAATGTTAATGTTCTATCACTTTCTCTCGGTGGTGGCATGTCTGATTATTACAGAGACAGTGTTGCTATTGGTGCTTTTGCTGCAATGGAGAAAGGAATTCTCGTTTCTTGTTCCGCTGGAAATGCTGGTCCTAGTGCTTATAGTTTATCTAATGTAGCTCCATGGATCACTACTGTTGGTGCTGGTACACTTGATCGTGATTTCCCTGCTTCTGTTGGTCTCGGTAACGGATTAAACTATTCCGGCGTGTCGCTTTATCGAGGCAACGCTTTACCGGATTCTCCGTTACCTTTGATTTACGCAGGGAATGCTACTAATGCTACCAATGGGAATTTGTGTATGACTGGAACTTTATCGCCGGAGATGGTTGCCGGGAAGATTGTTTTATGTGACCGTGGGATGAATGCTAGAGTTCAGAAAGGTGCGGTGGTGAAAGCTGCCGGAGGGTTAGGCATGGTGTTGAGTAACACGGCGGCGAACGGTGAAGAGCTGGTGGCGGATACTCATTTATTACCGGCGACGGCAGTTGGTGAGAAAGAAGGTGATGCAATcaagaaatatttattttccgATGCAAAACCGACGGTTAAGATTTTGTTTCAAGGAACAAAAGTTGGAGTTGAGCCTTCTCCGGTTGTCGCGGCGTTTAGTTCACGTGGTCCAAACTCAATCACACCGCAGATCTTGAAACCTGATCTAATCGCGCCAGGTGTCAACATCTTAGCTGGGTGGTCAAAGGCCGTAGGACCCACTGGTTTACCAGTTGATGAGAGACGCGTGGATTTCAATATTATCTCTGGTACATCTATGTCCTGTCCTCACGTGAGTGGTTTAGCCGCTTTGATTAAATCGGCTCATCCGGAGTGGAGCCCAGCTGCTATCAGGTCGGCTTTGATGACAACGTCTTATACGGCTTACAAAAACGGTAACAAATTGCAAGATAGTGCAACTGGAAAACCCTCCACACCGTTTGATCATGGATCAGGACACGTGGATCCTGTTGCTGCACTTAATCCTGGTTTGGTTTATGACTTAACCGTGGATGATTATTTAGGTTTTCTCTGTGCGTTGAACTACACAGCAACGGAAATAACAGCTTTAGCAAGGAGAAAGTTCCAGTGTGACGCGGGTAAAAAGTACAGTGTGTCTGATCTTAATTACCCTTCATTTGCCGTTGTTTTTGATACAATGGGTGGGGTTAATACAGTTAAACACACTAGAAGTCTTACAAATGTGGGACCCGCGGGAACTTACAAAGCTTCCGTAACGTCTGATTCAAAAGCCGTGAAAATAACCGTTGATCCGGAAGAGTTGAGTTTCAAGGAGAATGAGAAGAAAACGTTTACCGTAACGTTTAGTTCTTCGGGTTCAAAACCTCAGACGGTGAATGAATTTGGAAGATTGGAATGGAGTAATGGGAAGACTATTGTTGGAAGTCCAATTTCGATTAGTTGGGATTGA 2280 0.443 MGFSFSFHKSFPIVLLVLLMGLCDASSSLKKTYIVHVAKSEMPESFEHHTLWYESSLQSASESAEMMYTYENAIHGFSTRLTDEEARLLESQTGILAVWPEVKYELHTTRTPQFLGLDKTADMFPASSSGSDVVVGVLDTGVWPESKSFDDTGFGPIPTTWKGACESGTNFTASNCNKKLIGARYFSKGAEAMLGPIDETTESKSPRDDDGHGTHTSTTAAGSVVSGASLFGYASGTARGMATRARVAAYKVCWKGGCFSSDILAAIDKAISDNVNVLSLSLGGGMSDYYRDSVAIGAFAAMEKGILVSCSAGNAGPSAYSLSNVAPWITTVGAGTLDRDFPASVGLGNGLNYSGVSLYRGNALPDSPLPLIYAGNATNATNGNLCMTGTLSPEMVAGKIVLCDRGMNARVQKGAVVKAAGGLGMVLSNTAANGEELVADTHLLPATAVGEKEGDAIKKYLFSDAKPTVKILFQGTKVGVEPSPVVAAFSSRGPNSITPQILKPDLIAPGVNILAGWSKAVGPTGLPVDERRVDFNIISGTSMSCPHVSGLAALIKSAHPEWSPAAIRSALMTTSYTAYKNGNKLQDSATGKPSTPFDHGSGHVDPVAALNPGLVYDLTVDDYLGFLCALNYTATEITALARRKFQCDAGKKYSVSDLNYPSFAVVFDTMGGVNTVKHTRSLTNVGPAGTYKASVTSDSKAVKITVDPEELSFKENEKKTFTVTFSSSGSKPQTVNEFGRLEWSNGKTIVGSPISISWD 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02158 759 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 757 IPR045051 -
Tsu04g02158 759 ProSiteProfiles Serine proteases, subtilase domain profile. 103 610 - -
Tsu04g02158 759 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 22 757 - -
Tsu04g02158 759 Gene3D - 338 479 - -
Tsu04g02158 759 Pfam Peptidase inhibitor I9 32 107 IPR010259 -
Tsu04g02158 759 CDD Peptidases_S8_3 104 576 IPR034197 -
Tsu04g02158 759 Gene3D Peptidase S8/S53 domain 132 623 IPR036852 GO:0004252|GO:0006508
Tsu04g02158 759 Pfam PA domain 384 457 IPR003137 -
Tsu04g02158 759 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 107 IPR037045 -
Tsu04g02158 759 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Tsu04g02158 759 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Tsu04g02158 759 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Tsu04g02158 759 Pfam Subtilase family 130 583 IPR000209 GO:0006508|GO:0008236
Tsu04g02158 759 Gene3D - 627 758 - -
Tsu04g02158 759 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Tsu04g02158 759 Pfam Fibronectin type-III domain 657 756 IPR041469 -
Tsu04g02158 759 CDD PA_subtilisin_like 344 471 - -
Tsu04g02158 759 SUPERFAMILY Subtilisin-like 106 614 IPR036852 GO:0004252|GO:0006508
Tsu04g02158 759 MobiDBLite consensus disorder prediction 198 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02158 Tsu-Chr4 23806362 23809183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02158 15 758 Subtilisin-like Serine Gene Family AT5G67360 73.262 0.0 1131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02158 - - gmx:100815413 1226.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02158 04 23806362 23809183 Tsu04g02158 04 23806362 23809183 ECH
Tsu05g00561 05 4590956 4593068 Tsu04g02158 04 23806362 23809183 PCT