Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02145 ATGTCTATGAAAATAGTTCATCAAAACCAAAATGCCCAATCATCAAAACCTCGTCACAAAAAGACATACTCATGCAACTTTTGCATGAGAAAGTTTTACAGTTCACAAGCTTTAGGGGGACACCAAAATGCAcacaaaagagaaagagaagcAGCAAGAAAATTCCAATTATCTCATAATTCTTTGGTGGCAAGGTCACTAGCAATCAAGCCTCACTCTCTTGTGCACAAACAAAGTAGAGAAAGAGCTGCTACTATGGTGGCTCAATTCAATGTTAATGATGCAATGGCATGGACACCCCTTGTTCTTGAACATGGTGTTGATTTTGTTTGGCATGGAAGCTTTCGGACGGATTTGCCAAAGCAAGAATCAGATATACATAATAAGCTGGACTTAGATCTTAGGCTTTGA 411 0.3698 MSMKIVHQNQNAQSSKPRHKKTYSCNFCMRKFYSSQALGGHQNAHKREREAARKFQLSHNSLVARSLAIKPHSLVHKQSRERAATMVAQFNVNDAMAWTPLVLEHGVDFVWHGSFRTDLPKQESDIHNKLDLDLRL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02145 136 PANTHER ZINC FINGER PROTEIN 4-LIKE 7 136 - -
Tsu04g02145 136 SUPERFAMILY beta-beta-alpha zinc fingers 19 50 IPR036236 -
Tsu04g02145 136 ProSitePatterns Zinc finger C2H2 type domain signature. 25 45 IPR013087 -
Tsu04g02145 136 ProSiteProfiles Zinc finger C2H2 type domain profile. 23 50 IPR013087 -
Tsu04g02145 136 Gene3D Classic Zinc Finger 1 85 - -
Tsu04g02145 136 PANTHER ZINC FINGER PROTEIN 4-LIKE 7 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02145 Tsu-Chr4 23703234 23703644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02145 9 126 C2H2 Transcription Factor Family AT1G24625 37.121 6.32e-19 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02145 - - ccaj:109809498 165.236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02145 04 23703234 23703644 Tsu04g02145 04 23703234 23703644 ECH