Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02140 ATGCCAATTCAACACTTAATCTTTCTActtgtttttcttcaattctcATCACGACAATTCCCCTCACTTGCATATGATCACCAAGGCACATACTTCATTAACTGCGGATCAGATACCGAAGTTAATGAAAATAACAATCTGCATATTGGTGAATCAAACCGTAACTACCCTACAAAAAATTTCGGCAATAGCTACACAGAAATCGATCATTCAACAGTGTCACTTCTGTACCAGACAGCAAGAATTTTCCAATCTGAATCTTCCTATGAATTTGATACCGAACCAAACAACACCTACATGGTACGTTTCCatttcctttcattttcttcacCAACTAACCTTTCCACTGCAAAATTCAATGTTTCTGTTCCCAATTTTACTCTATTACAAAATTTCGACGCAAAACACACAACAAACCAAGGATTAATAAAAGAGTATTTCGTTAAAATCATCCGGAAAAGATTCAAAATCACTTTCACACCTCTAATATCATCATTTGCATTTGTTAATGCAATAGAACTCTTTATGCTCCCAACTCATTTTATCCCTGATTCAATTGCACGTTTCAATTACACCGGTTCTACTGGTCGAAGCTTATTTCCTTACAGTGGCAGTTTACTCTCACGAGCTTTTGAAACCAAACACCGTCTTAACATCGGTGGAGAACCTGTCAATAGGGATACTGATAACTTAGGGAGAGATTGGTTACCAGATGACATTTATATAACTGATTCACAGAACTCTAAGTATAGTCCCTTTTTTGGAGGTACAGTTAAATACAATGcagatgatgaatctgatggtccATATTCAAATGAATATACTGCTCCAGATGTTATTTATCAAACTGCCAGAGAGAGTAAAAACGGTTCTAACGGTTTAGGTATAAGTTGGAGTGTTCCTGTGGAGAAGAATACAGATCATTTCCTTAGGCTTCACTTTTGTGACATTTTTAATGTACAGAGTCTACTTACAACCTTCATTCTAAACATTTATGACCAAGTTGTTACTTCAGAGGTAAATAGTGACGCAGATTTGTCTTCTgcttattattatgattttgtgGTTCGTACAGATGGCTCTGGACTATTGAAAGTTAGTGTGGTACCTAATACAACAGTTGTTAATCCGAACACGTTTTTAAATGGGCTAGAACTAATGAAAGTGATTGAATCGCCAGGTTTGAATTTAGATTCAAATCCAAAGAAGATTAGTCTTCCTATGGTGGTGGGTTCGGTTGTTGGAGGCTTAGCTTTGATTTTTGTTGTGGTGGTTTTGATTTTTCGGACTTGTAAATTCAGGAAACAAAAGTCTGTTGAGAATTCCGATTTGTTGAAGATTCCAACTGTTGTAGGAGGGATTTCTCAGAGCAGATTAACTTGTGGAAATACAACTCAAGGCCCACCTTTAACTAAAATAAACCTTGGCTTGAAAATTTCCTTGCTTGATCTTCAATTCGCAACAGAGAATTTCAATGCGAAGAGGATAATTGGAAAGGGTGGTTTTGGAATTGTTTATAAGGGAGTTCTCAATAATGGAATGAGTGTAGCAGTGAAAAGAAGTGTGCTAGGGTCAGGTCAAGGACTTCctgaatttcaaaatgaaataatGGTTTTGTCCAAGATTCGTCACATACACCTTGTTTCCTTAATCGGTTATTGTGATGAAATTTATGAGATGATACTTGTTTACGAGTACATGGAAAAGGGGACACTTAGAGAAAATTTGTACAATACAAATTTGCCTTGTTTGACATGGAAGCAAAGGCTTGAGATTTGCATTGGCGCTGCTAGAGGTCTTCATTACCTTCACAAAGGAGTAGATGGTGGAATAATTCACCGTGACGTGAAATCAACTAATATATTGCTTGATGAGAATCTTGTAGCTAAAGTTGCTGATTTTGGTCTTTCAAGGACAGGTCCTCTTGATCAACATTCTCATGTCAGCACATGTGTTAAAGGAACTTTTGGGTATCTTGATCCTGATTACATTAGATCACAAAAACTTACAGAAAAATCTGATGTTTATTCTTTTGGGGTGGTTCTACTTGAAGTGTTGTGTGCAAGACCAGCCATTGATTTGTCTTGTCCAAGTGAGCAAGTCAATTTGGCTGAGTGGGGATTGCTTTGCAAAGAAAAAGGAATACTTGAAGAGATCGTTGATCCTTCCATCGTGAGACAAATTAATCAAAACTCACTTAGAGTATTTAGTGAGACTGTAGAAAAATGCTTAAAGGATTATGGTTGTGATAGGCCAACAATGCTTGATGTGTTGTGGGACTTGGAATATGCTTTGCAACTTCAGATAGAACCACATGAGGATAGTTCTAGCAGTGCTTTTCTATCACTTCAATTGCCTAAGATTTATCGTTTACCTTCTCCGTCTACACTGACTGAAGTGGATGGCATATTTATTGGGAGAGTTGATGAATCTGAAACTACAACATCGATGATGCTTGATAGAATTTCATGTGAAGCAAATCAAGGCACAACGATCAACTCGCAAGTGTCTCCACTGGAAGGGTCATTTTCTTAG 2535 0.3594 MPIQHLIFLLVFLQFSSRQFPSLAYDHQGTYFINCGSDTEVNENNNLHIGESNRNYPTKNFGNSYTEIDHSTVSLLYQTARIFQSESSYEFDTEPNNTYMVRFHFLSFSSPTNLSTAKFNVSVPNFTLLQNFDAKHTTNQGLIKEYFVKIIRKRFKITFTPLISSFAFVNAIELFMLPTHFIPDSIARFNYTGSTGRSLFPYSGSLLSRAFETKHRLNIGGEPVNRDTDNLGRDWLPDDIYITDSQNSKYSPFFGGTVKYNADDESDGPYSNEYTAPDVIYQTARESKNGSNGLGISWSVPVEKNTDHFLRLHFCDIFNVQSLLTTFILNIYDQVVTSEVNSDADLSSAYYYDFVVRTDGSGLLKVSVVPNTTVVNPNTFLNGLELMKVIESPGLNLDSNPKKISLPMVVGSVVGGLALIFVVVVLIFRTCKFRKQKSVENSDLLKIPTVVGGISQSRLTCGNTTQGPPLTKINLGLKISLLDLQFATENFNAKRIIGKGGFGIVYKGVLNNGMSVAVKRSVLGSGQGLPEFQNEIMVLSKIRHIHLVSLIGYCDEIYEMILVYEYMEKGTLRENLYNTNLPCLTWKQRLEICIGAARGLHYLHKGVDGGIIHRDVKSTNILLDENLVAKVADFGLSRTGPLDQHSHVSTCVKGTFGYLDPDYIRSQKLTEKSDVYSFGVVLLEVLCARPAIDLSCPSEQVNLAEWGLLCKEKGILEEIVDPSIVRQINQNSLRVFSETVEKCLKDYGCDRPTMLDVLWDLEYALQLQIEPHEDSSSSAFLSLQLPKIYRLPSPSTLTEVDGIFIGRVDESETTTSMMLDRISCEANQGTTINSQVSPLEGSFS 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02140 844 SMART serkin_6 491 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02140 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Tsu04g02140 844 CDD STKc_IRAK 497 762 - -
Tsu04g02140 844 ProSiteProfiles Protein kinase domain profile. 491 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02140 844 Pfam Malectin-like domain 34 389 IPR024788 -
Tsu04g02140 844 Gene3D Transferase(Phosphotransferase) domain 1 567 780 - -
Tsu04g02140 844 PANTHER OS07G0166700 PROTEIN 22 778 IPR045272 GO:0004714|GO:0006468
Tsu04g02140 844 SUPERFAMILY Protein kinase-like (PK-like) 472 762 IPR011009 -
Tsu04g02140 844 Pfam Protein tyrosine and serine/threonine kinase 493 698 IPR001245 GO:0004672|GO:0006468
Tsu04g02140 844 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Tsu04g02140 844 PANTHER BNAC03G27170D PROTEIN 22 778 - -
Tsu04g02140 844 Gene3D Phosphorylase Kinase; domain 1 458 566 - -
Tsu04g02140 844 Gene3D - 210 390 - -
Tsu04g02140 844 Gene3D - 26 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02140 Tsu-Chr4 23640331 23642998 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02140 25 778 Receptor kinase-like Gene Family AT2G23200 44.020 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu04g02140 Malectin_like 8.8e-26 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02140 - - mtr:MTR_4g095032 1098.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02140 04 23640331 23642998 Tsu04g02140 04 23640331 23642998 ECH