Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02138 ATGGCAATTCAATATTACTCTATCCTTTTActtacttttcttcttcaattctcaTCACTACACTTCCCCTCACTTGCATATGATCACCAAAACACATACTTCATCAATTGCGGCTCAAATATCAATGTTAATGAAAGTAACAACCTTTATATTGGTGAATCAAATCCTATTTACCCTCaaacaaatttcaagaaaaCTGGTGGAATCATTCACCGTGACGTGAAATCCACAAACATATTGCTTGATGAGAATCTTGTAGCTAAAGTTGCTGATTTTGGTCTTTCAAGAAGTGGTCCTCTTGATCAGCATTCTTATGTCAGCACAGGTGTTAAAGGAACTTTTGGGTATCTTGATCCTGAGTACTTCAGATCACAACAGCTTACAGAAAAATCTGATGTTTATTCATTTGGTGTGGTTCTACTCGAAGTGTTGTGTGCCAGAACAGCCATTGACCCGTCGCTTCCAAGGGAACAGGTCAACTTGGCTGAGTGGGGAATATTTTGCAAAGACAAAGGGATACTTGAAGACATCATTGATCCTTCCATCAAGGGACAAATTGAACCAAACTCACTTAGAAAGTTTAGTGAGACTGTGGATAAATGCTTACAAGATGATGGCAGTGATCGGCCATCAATGGGTGATGTGTTGTGGGACTTGGAATATGCTTTACAGCTTCAGCGAGGTGCAATACAAAGAGAACCACATGAGGATAGTTCTAGCAGTGTCTCTGTATCAATTCAATTGCCTAATATTCGCCGTTTACCTTCTTTGGGTACACTGACTNtctat 789 0.3777 MAIQYYSILLLTFLLQFSSLHFPSLAYDHQNTYFINCGSNINVNESNNLYIGESNPIYPQTNFKKTGGIIHRDVKSTNILLDENLVAKVADFGLSRSGPLDQHSYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARTAIDPSLPREQVNLAEWGIFCKDKGILEDIIDPSIKGQIEPNSLRKFSETVDKCLQDDGSDRPSMGDVLWDLEYALQLQRGAIQREPHEDSSSSVSVSIQLPNIRRLPSLGTLTXY 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02138 263 PANTHER OS07G0166700 PROTEIN 66 247 IPR045272 GO:0004714|GO:0006468
Tsu04g02138 263 SUPERFAMILY Protein kinase-like (PK-like) 68 217 IPR011009 -
Tsu04g02138 263 ProSiteProfiles Protein kinase domain profile. 1 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02138 263 Pfam Protein kinase domain 68 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02138 263 PANTHER BNAC03G27170D PROTEIN 66 247 - -
Tsu04g02138 263 SMART serkin_6 25 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02138 263 Gene3D Transferase(Phosphotransferase) domain 1 60 226 - -
Tsu04g02138 263 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02138 Tsu-Chr4 23625374 23636139 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02138 49 242 Receptor kinase-like Gene Family AT3G46290 63.402 5.72e-80 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu04g02138 Pkinase 3.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02138 - - mtr:MTR_4g095012 362.073