Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02136 ATGGCAACTCTTCACCTCCACAAAATTCAATACTCAATATTTCTACTTGCtgcttttcttcttcaattctttacACTACAATTCCCCTCACTTGCATATGATCCCCAAGATATATACTTCATAAAATGCGGCTCAAATAACAATGTTATGGTTAACCAAAGTAAAGTTTATATTGGTGAATCAAACCGTAATTACCCTAAAACAAGTTTCAGCAGCAAAAATAGCTACACAGAAACCAATCAATCAACAGTGCCTTCACCTCTCTACCAAACAGCAAGAATTTTCCATTCTGAATCTTACTACGAATTCGATACCGAACCAAACAACACCTACATGGTACGTTTCCATTTCTTTTCATTCTCTTCAGCAACTAACCTTTACACTGCAAAATTCAATGTTTTCGTTTCTGGTTTCTCTCTGTTGCAAAATTTCGATGCAGAAAACACCACCAAGTCTGTTGTAATAAAAGAATATTTCCTTAAAATCGTCGGAAAAAGATTCAAAATAAAGTTCACACCCCAAATATCATCATTCGCGTTTGTTAATGCCATAGAACTCTTTATGCTCCCCGTTCATTTAATCCCCGATTCAATCCAGCGATTCAATTACACGGGTTCTACTGGTCAAGACTTCTCTACTTACAGTGGCGGTTTACACTCACGAGCTTTGGAAACCAAACACCGTCTTAACGTTGGTGGCCAAACTGTTGATAGAATATCCGATAACTTAATGAGAGAATGGTTACCGGATGACAGTTATATAACTGATCCACAAAACGCTAAGAATAGTAACTTTTTTGGAggtacaattaaaaaaaaggaagatgatgaatctgatgggTTAAATTCAGATCAATATACTGCTCCAGATACTGTTTATCAAACTGCCAAAGAGAGTAAAAACGGTTCCAAAGGTTTAAATATAAGTTGGAGTGTTCCTGTGGAGAAGAATACAGATCATTTCCTTAGGCTTCACTTTTGTGACATTTTTAATCCCCAGGGTCTACTTACAACCTTCATTCTAAACATTTATGACCAAGTTGTTACTTCAGAGGTAAATAGTGACGCAGATTTGTCTTCTgcttattattataattttgtggTTCGTTCAGATGGCTCTGGACTATTGAAGGTTAGCGTGGTACCTAATACAACATCTGCGGAACCGAATGCGTTTTTAAATGGACTAGAACTGATGAAAGTTATTGAATTGTCAGGTTCACTTCCCTTATATGATTTGGATTCCAATTCGAAGAAGATTAGACTACCTGCGGTGGTGGGTTCGGTTGTTGGAGGTTTAGTTTTGGTGTCTGTTGTGGTGGTTTTGTTTCTTTGGATCTGTAAAATCAGGAAACAAAAGCCTGTTGAGAATTACAAATGGTTGCCGACTCGAGCTTCCACAGGAGGGAGTTCTCATGGCAGATTAACTGATAACATTAACCTTGGATTGAAAATCTCCTTGCGTGATCTACAATTGGCAACGGAGAATTTCAATGCGAAGAGGATAATTGGAAAAGGTGGTTTTGGAAATGTTTATAAGGGAGTTCTCAAGAATGGAATGAGTGTTGCAGTGAAAAGAAGTGAGCAAGATTCAGGTCAAGGATTTCCTGAATTTGAAGCTGAGATAATGGTTTTGTCCAATATTCGTCACAGACACCTCGTTTCCTTAATCGGTTATTGTGATGAAAGGCATGAGATGATACTTGTATATGAGTACATGGAAAAAGGGACACTTAGAGACAGCTTGTACAGTACAAATTTGACTAATTTTTTGACTTGGAAGCAAAGGCTTGAGATTTGTATTGGAGCTGCAAGAGGTCTTCATTACCTTCACAAAGGTGCAGCTGGTGGAATCATTCACCGTGACGTGAAATCCACAAACATATTGCTTGATGAGAATCTTGTAGCTAAAGTTGCTGATTTTGGTCTTTCAAGAAGTGGTCCTCTTGATCAGCATTCTCATGTCAGCACAGGTGTTAAAGGAACTTTCGGGTACCTTGATCCTGAGTACTTTCAATCACAACAGCTTACTGAAAAGTCTGATGTTTATTCATTCGGTGTGGTTTTACTCGAAGTGTTATGTGCAAGACCAGCCATTGACCCGTCGCTTCCAAGGGATGAGGTGAACTTGGCTCACTGGGGAATATTTTGCAAAGACAAAGGGATACTTGAAGACATCGTTGATCCTTCCATCAAGGGACAAATTAATCCAAACTCACTTAGAAAGTTTAGTGAGACGGTGAATAAATGCTTACAAGAAGATGGCTGTGATCGGCCATCAATGGGTGATGTGTTGTGGGACTTGGAATATGCATTGCAGCTTCAGAGAGGCATAATCCACAGAGAACCACATGAGGATAGTTCTACCAATGCTTCTGTATCAATTCAATTGCCTAATATTCGCCGTTTACCTTCTCTGTATTCAATGTCTGAAATGGATGATATGTCTATTGGGATGGTTAATGAATCAAATAGTTCAGCAGATCCTGTTTTCTCTCAGTTGAAAAATGGGGATGCTAGATAG 2523 0.3761 MATLHLHKIQYSIFLLAAFLLQFFTLQFPSLAYDPQDIYFIKCGSNNNVMVNQSKVYIGESNRNYPKTSFSSKNSYTETNQSTVPSPLYQTARIFHSESYYEFDTEPNNTYMVRFHFFSFSSATNLYTAKFNVFVSGFSLLQNFDAENTTKSVVIKEYFLKIVGKRFKIKFTPQISSFAFVNAIELFMLPVHLIPDSIQRFNYTGSTGQDFSTYSGGLHSRALETKHRLNVGGQTVDRISDNLMREWLPDDSYITDPQNAKNSNFFGGTIKKKEDDESDGLNSDQYTAPDTVYQTAKESKNGSKGLNISWSVPVEKNTDHFLRLHFCDIFNPQGLLTTFILNIYDQVVTSEVNSDADLSSAYYYNFVVRSDGSGLLKVSVVPNTTSAEPNAFLNGLELMKVIELSGSLPLYDLDSNSKKIRLPAVVGSVVGGLVLVSVVVVLFLWICKIRKQKPVENYKWLPTRASTGGSSHGRLTDNINLGLKISLRDLQLATENFNAKRIIGKGGFGNVYKGVLKNGMSVAVKRSEQDSGQGFPEFEAEIMVLSNIRHRHLVSLIGYCDERHEMILVYEYMEKGTLRDSLYSTNLTNFLTWKQRLEICIGAARGLHYLHKGAAGGIIHRDVKSTNILLDENLVAKVADFGLSRSGPLDQHSHVSTGVKGTFGYLDPEYFQSQQLTEKSDVYSFGVVLLEVLCARPAIDPSLPRDEVNLAHWGIFCKDKGILEDIVDPSIKGQINPNSLRKFSETVNKCLQEDGCDRPSMGDVLWDLEYALQLQRGIIHREPHEDSSTNASVSIQLPNIRRLPSLYSMSEMDDMSIGMVNESNSSADPVFSQLKNGDAR 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02136 840 CDD STKc_IRAK 503 769 - -
Tsu04g02136 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Tsu04g02136 840 Gene3D Transferase(Phosphotransferase) domain 1 573 790 - -
Tsu04g02136 840 SMART serkin_6 497 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02136 840 Gene3D - 36 189 - -
Tsu04g02136 840 Gene3D - 222 402 - -
Tsu04g02136 840 Pfam Malectin-like domain 42 401 IPR024788 -
Tsu04g02136 840 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Tsu04g02136 840 MobiDBLite consensus disorder prediction 819 840 - -
Tsu04g02136 840 Pfam Protein tyrosine and serine/threonine kinase 499 765 IPR001245 GO:0004672|GO:0006468
Tsu04g02136 840 Gene3D Phosphorylase Kinase; domain 1 468 572 - -
Tsu04g02136 840 ProSiteProfiles Protein kinase domain profile. 497 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02136 840 PANTHER BNAC03G27170D PROTEIN 30 801 - -
Tsu04g02136 840 SUPERFAMILY Protein kinase-like (PK-like) 484 766 IPR011009 -
Tsu04g02136 840 PANTHER OS07G0166700 PROTEIN 30 801 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02136 Tsu-Chr4 23597073 23599759 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02136 13 840 Receptor kinase-like Gene Family AT2G23200 43.670 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu04g02136 Malectin_like 1.5e-28 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02136 - - mtr:MTR_4g095012 1083.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02136 04 23597073 23599759 Tsu04g02136 04 23597073 23599759 ECH