Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02135 ATGGCAACTCTTCACCTCCACAAAATACAGCACTCTATCTTTCTACTTGctacttttcttcttcaattctccACACTACAATTCCCCTCACTTGCATATGATCCTCAAGACACGTACTTCATCAATTGCGGCTCAGACAACGACGTGCATGAAAACAACAATTATATTGGTGAATCAAACCGTAGTTACCAAACAACTTTCAGAAAAAGCTCCAAAGAAACCAATCAATCAATAGTGCCTTCACCTCTCTACCAATCAGCAAGAATCTTCCGTTCAACCTCTTCCTACGAATTCGATACCTTCCCAAACGAAACCTACATGGTACGTTTCCATTTCTACTCATTCTCTTCAAATATTAACCTTTACACTGCAAAATTCAACGTTTCTGTTCCCGGTTTTTCTCTGTTACAAAATTTCGAGGCTGAAAACACCACAGACCCAGGCTTAATTAAAGAGTATATCGTTAAAATCATCCGAAAGAGATTCAAAATCACTTTCACACCACAAAAATCATCATTCGCGTTTGTTAACGCAATAGAACTCTTTAAGCTCTCAACTCATTTGATCCCCGATCTCAGGAAGTTCAATTACACTACAGGTCGAGCTTTATCTATTTATAGTAACAATTTCCTCTCACAAGCTTTGGAAACCAAACACCGTCTCAACGTTGGTAGCGAACCTGTAACTAGAGAAAACGATAATTTGACGAGAGAATGGTTACTTGATGACAGTTATATAAGCGATCCACAAGACGCTAAGAATAGTACCTTTTTCACAGGTAAAATTAACCATGCTACAGATGATGAATATGATGGTTTGCATTCAGATAAATATACTGCTCCAGATGTTGTTTATCAAACTGCCAAAGAGAGTAAAAATGGTTCCAAAGGTTTAAATATAAGTTGGAGTGTTCCTGTGGAGAAGAATACAGACCATTTCCTTAGGCTTCACTTTTGTGACAATATTAATCTACAGGGTCTACTTACAACCTTCAATATCAACATTTATGACCAGATTGTTATTTCAAAAGTAAATAATGATGGATATTTGTCTACTccttattattatgattttgtgGTTCCTTCGGATGGCTCTGGACTATTGAAGGTTAGTGTGGTACCTAATAAAACAGCTGCTAAACCAAACGCATTTTTAAACGGTCTAGAACTAATGAAAGTGATTGAATCGTCAGGTCCAATAGCCTTAGATGATTCAGATTCAAATTCGAAGATTAGTCTTCCTGTGGTGGTGGGTTCGGTCATTGGAGGTTTAGTTTTGGTTTCTGTAATGGTCGTTTTGTTTATTTGGATCTGTAAAAACAGGAAACAAAAGCCTGTTGAGAATTACAAATGGTTGCCAGCTCGAGCTTCCGCAGGAGGGAGTTCTCACGGCAGATTAACTGATAACATTAACCTTGGATTGAAAATCTCCTTGCGTGATCTACAATCGGCAACAGAGAATTTCAATGCGAAGAGGGTAATTGGAAAAGGTGGTTTTGGAAATGTTTATAAGGGAGTTCTCAAGAATGGAATGAGTGTTGCAGTGAAAAGAAGTGAGCAAGAGTCAGGTCAAGGATTTCCTGAATTTGAAGCTGAGATAATGGTTTTGTCCAAGATTCGTCACAGACACCTTGTTTCCTTAATCGGTTATTGTGACGAAAGGTATGAGATGATACTTGTTTATGAGTATATGGAAAAGGGGACACTTAGAGACAGCTTGTACAGTACAAATTTGACTAGTTTTTTGACTTGGAAGCAGAGGCTTGAAATTTGTATTGGTGCTGCTAGAGGTCTTCATTACCTTCACAAAGGTGCAGCTGGTGGAATCATTCACCGTGACGTGAAATCCACAAACATATTGCTTGATGAGAATCTTGTAGCTAAAGTTGCTGATTTTGGTCTTTCAAGAAGTGGTCCTCTTGATCAGCATTCTCATGTCAGCACAGGTGTTAAAGGAACTTTCGGGTACCTTGATCCTGAGTACTTTCAATCACAACAGCTTACTGAAAAGTCTGATGTTTATTCATTCGGTGTGGTTTTACTCGAAGTGTTATGTGCAAGACCAGCCATTGACACGTCCCTTCCAAGGGATGAGGTGAACTTGGCTCACTGGGGAATATTTTGCAAAGACAAAGGGATACTTGAAGACATCGTTGATCCTTCCATCAAGGGACAAATTAATCCAAACTCACTTAGAAAGTTTAGTGAGACGGTGAATAAATGCTTACAAGATGATGGCTGTGATCGGCCATCAGTGGGTGATGTGTTGTGGGACTTGGAATATGCTTTGCAGCTTCAGAGAGGTATAATCCATAGAGAACCACATGAGGATAGTTCTACCAATGCTTCTGTATCAATTCAATTGCCTAATATTCGCCGTTTACCTTCTCTTTATTCAATGACTGAAATAGATGATATGTCCATTGGGATGGTTAATGATGAATCAAATAGTTCAGCAGATCCTGTTTTCTCTCAGTTGAGAATTGGGGATGCTAGATAG 2499 0.383 MATLHLHKIQHSIFLLATFLLQFSTLQFPSLAYDPQDTYFINCGSDNDVHENNNYIGESNRSYQTTFRKSSKETNQSIVPSPLYQSARIFRSTSSYEFDTFPNETYMVRFHFYSFSSNINLYTAKFNVSVPGFSLLQNFEAENTTDPGLIKEYIVKIIRKRFKITFTPQKSSFAFVNAIELFKLSTHLIPDLRKFNYTTGRALSIYSNNFLSQALETKHRLNVGSEPVTRENDNLTREWLLDDSYISDPQDAKNSTFFTGKINHATDDEYDGLHSDKYTAPDVVYQTAKESKNGSKGLNISWSVPVEKNTDHFLRLHFCDNINLQGLLTTFNINIYDQIVISKVNNDGYLSTPYYYDFVVPSDGSGLLKVSVVPNKTAAKPNAFLNGLELMKVIESSGPIALDDSDSNSKISLPVVVGSVIGGLVLVSVMVVLFIWICKNRKQKPVENYKWLPARASAGGSSHGRLTDNINLGLKISLRDLQSATENFNAKRVIGKGGFGNVYKGVLKNGMSVAVKRSEQESGQGFPEFEAEIMVLSKIRHRHLVSLIGYCDERYEMILVYEYMEKGTLRDSLYSTNLTSFLTWKQRLEICIGAARGLHYLHKGAAGGIIHRDVKSTNILLDENLVAKVADFGLSRSGPLDQHSHVSTGVKGTFGYLDPEYFQSQQLTEKSDVYSFGVVLLEVLCARPAIDTSLPRDEVNLAHWGIFCKDKGILEDIVDPSIKGQINPNSLRKFSETVNKCLQDDGCDRPSVGDVLWDLEYALQLQRGIIHREPHEDSSTNASVSIQLPNIRRLPSLYSMTEIDDMSIGMVNDESNSSADPVFSQLRIGDAR 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02135 832 PANTHER BNAC03G27170D PROTEIN 30 792 - -
Tsu04g02135 832 Gene3D Phosphorylase Kinase; domain 1 461 563 - -
Tsu04g02135 832 MobiDBLite consensus disorder prediction 811 832 - -
Tsu04g02135 832 SUPERFAMILY Protein kinase-like (PK-like) 475 757 IPR011009 -
Tsu04g02135 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Tsu04g02135 832 PANTHER OS07G0166700 PROTEIN 30 792 IPR045272 GO:0004714|GO:0006468
Tsu04g02135 832 Pfam Protein tyrosine and serine/threonine kinase 490 754 IPR001245 GO:0004672|GO:0006468
Tsu04g02135 832 Gene3D - 36 186 - -
Tsu04g02135 832 Gene3D - 214 394 - -
Tsu04g02135 832 SMART serkin_6 488 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02135 832 Gene3D Transferase(Phosphotransferase) domain 1 564 781 - -
Tsu04g02135 832 CDD STKc_IRAK 494 760 - -
Tsu04g02135 832 ProSiteProfiles Protein kinase domain profile. 488 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02135 832 ProSitePatterns Protein kinases ATP-binding region signature. 494 516 IPR017441 GO:0005524
Tsu04g02135 832 Pfam Malectin-like domain 41 393 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02135 Tsu-Chr4 23593400 23595898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02135 12 832 Receptor kinase-like Gene Family AT2G23200 44.070 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu04g02135 Malectin_like 2.2e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02135 - - mtr:MTR_4g095012 1059.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02135 04 23593400 23595898 Tsu04g02135 04 23593400 23595898 ECH