Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02124 ATGAAAAACTTCACCACCATAACCCTTTCTCTTCTTCTCGCACTCTTAACACTAACCATTAACCAATCTTTTTCCCTCTCTAACGACGGCGTTTTGTTACTTTCTTTCAAATACGCTGTTCTCAATGACCCTTTATCAGTTCTTTCAAATTGGAACTATAGTGACCAAACACCATGTTCATGgaacggtgtttcttgttccaACGTTGTAACACCATTTCGTGTTACTGCTTTATCACTACCAAATTCTCAACTTACATGTTCTATTCCTTCTGATCTTGGTTCCATTGAACATCTTCAAATTATTGATCTTTCTAACAATTCCATTAATGGGTCTCTTCCTTCTTCGTTCTTTCAACCAAATTCAAACCTTCGTTttcttaatttttcaaataatttaataacaGGGGAAGTTCCAGAGTCTTTAACAGAGCTTAAAAATCTTCAGTTTCTTAACTTTTCCGACAATGCTCTCACCGGAAAATTACCCAACAATCTCTCTAACATGCAAAACTTAACCGTAGCATCGTTTAAGAACAATTACTTAACCGGTTTTCTTCCAAAAGACTTACGAACTTTACAGATTTTGGATCTGTCTTCAAATTTGTTGAATGGAACTTTAAGTCCAGATTTTGGTGGTGACAATATTCGTTACTTAAACGTTTCTTACAACAGATTTTCCGGTGAAATTCCACCGGAGTTCGCCGAGAAAATTCCGAGTAACGCAACTGTTGATCTCTCGTTTAACAATCTCACCGGAGAGATACCTGATTCCTCTGTTTTGTTGAACCAGGAAACAAAATCTTTCTCCGGTAACAATGATCTATGTGGAGAACCAATGAAAAATCCATGTTCTATTCCTTCTTCTCCATCTTCTGAACCTAAAGATTCTTCTCCACCTGCAATTGCCGCAATGCCGAAGAGTTTCCCTGATTCTCCTCTATCACAACCAGCAGAGTCGAAAAAACAGAGTGGTTTGAGAAAAGGAACGATTGTAGGAATCGTGATTGGTGATTTCGTTGGAATTGGAATCTTAGCTATGGTTTTTGTTTACGTTTATAagttaaagagaaaaaaagatgaagaaaatgcaACAAAAAACGAAGCTAATACTACAAGAAGTGAAAGTTCATCTTCAACATTAGAAACAAAAGGTTTCACGAGATGGTCGTGTTTAAGAAAAAGaacagaagatgaagaatccTCGGAAACACCGAGTTCATCGGACAGTGACGTGGAAACAGCACCGCGAAATGCGGAAGGTATTGAAAACAAAAGCGGGTCAGGTTCTGGTTCGGGTTCTGGGTCGGGTACTCTTGTTACTGTTGATGGTGATAGAGAGCTTGAAGTTGAAACGCTTTTGAAAGCTTCTGCTTATATTTTAGGTGCTACTGGTTCAAGTATAATGTATAAAGCTGTTCTTGAAGACGGAACTTCTTTAGCGGTTCGGAGAATTGGTGAAAGTGGTGTTGAACGGTTCAAGGATTTTGAGAATCAAGTTCGGGTTATAGCGAAACTGGTTCATCCGAATTTAGTTCGGGTTCGTGGGTTTTATTGGGGTCATGATGAaaaactcattatctatgactTTGTTCCTAATGGTTGTCTCGCCAATGTTCGTTACAGGAAAGTGGGGTCTTCACCTAGCCATATACCGTGGGAAGTACGGCTTAAGATAGCAAAAGGAGTGGCACGTGGGCTTACTTATCTCCACGAGAAGAAGCACGTGCATGGAAATTTGAAGCCCACAAATATTCTATTGGGTAATGACATGGAGCCCAAAATTGGAGACTTTGGGCTTGAGAGAATAGTAACGGGTGACACAAGTTATAATAAAGCTGGTGGGTCGGCCCGTATATTTGGTAGCAAGAGATCAACCACCTCACGCGATAGTTTTCAAGATATTTCATTTGGGCCTAGCCCAAGCCCAAGTCCAAGTTCTATTGGCGGTGTGTCTCCTTATCATGCTCCTGAATCGCTTAGGAATTTAAAGCCTCATCCAAAGTGGGACGTGTATTCTTTCGGGGTCATGTTTCTTGAGCTTTTAACGGGGAAGATTgtggttttggatgatttgggCCAAGGGCCAGCGGTTATGGTTGAGGATAAGAATCGGGCTTTGAGGATGGTTGATGTGGCAATCCGTGCTGACATGGAAGGTAAAGAAGAGGCTTTGTTGGCTTATTTTAAGTTAGGGTATAGTTGTGTGACTAATGTTCCTCAAAAAAGGCCACAAATGAAAGAAGTGTTACAAGTACTTGAAAAAATACCATCTACATTGTCGTATTATTATAGTCATTGA 2301 0.3803 MKNFTTITLSLLLALLTLTINQSFSLSNDGVLLLSFKYAVLNDPLSVLSNWNYSDQTPCSWNGVSCSNVVTPFRVTALSLPNSQLTCSIPSDLGSIEHLQIIDLSNNSINGSLPSSFFQPNSNLRFLNFSNNLITGEVPESLTELKNLQFLNFSDNALTGKLPNNLSNMQNLTVASFKNNYLTGFLPKDLRTLQILDLSSNLLNGTLSPDFGGDNIRYLNVSYNRFSGEIPPEFAEKIPSNATVDLSFNNLTGEIPDSSVLLNQETKSFSGNNDLCGEPMKNPCSIPSSPSSEPKDSSPPAIAAMPKSFPDSPLSQPAESKKQSGLRKGTIVGIVIGDFVGIGILAMVFVYVYKLKRKKDEENATKNEANTTRSESSSSTLETKGFTRWSCLRKRTEDEESSETPSSSDSDVETAPRNAEGIENKSGSGSGSGSGSGTLVTVDGDRELEVETLLKASAYILGATGSSIMYKAVLEDGTSLAVRRIGESGVERFKDFENQVRVIAKLVHPNLVRVRGFYWGHDEKLIIYDFVPNGCLANVRYRKVGSSPSHIPWEVRLKIAKGVARGLTYLHEKKHVHGNLKPTNILLGNDMEPKIGDFGLERIVTGDTSYNKAGGSARIFGSKRSTTSRDSFQDISFGPSPSPSPSSIGGVSPYHAPESLRNLKPHPKWDVYSFGVMFLELLTGKIVVLDDLGQGPAVMVEDKNRALRMVDVAIRADMEGKEEALLAYFKLGYSCVTNVPQKRPQMKEVLQVLEKIPSTLSYYYSH 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02124 766 MobiDBLite consensus disorder prediction 621 653 - -
Tsu04g02124 766 MobiDBLite consensus disorder prediction 421 439 - -
Tsu04g02124 766 SUPERFAMILY Protein kinase-like (PK-like) 460 759 IPR011009 -
Tsu04g02124 766 PANTHER BNAC07G16060D PROTEIN 12 759 - -
Tsu04g02124 766 Pfam Leucine rich repeat 98 158 IPR001611 GO:0005515
Tsu04g02124 766 MobiDBLite consensus disorder prediction 271 326 - -
Tsu04g02124 766 MobiDBLite consensus disorder prediction 369 386 - -
Tsu04g02124 766 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 12 759 - -
Tsu04g02124 766 Gene3D Phosphorylase Kinase; domain 1 445 530 - -
Tsu04g02124 766 Gene3D Transferase(Phosphotransferase) domain 1 532 762 - -
Tsu04g02124 766 Coils Coil 355 375 - -
Tsu04g02124 766 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Tsu04g02124 766 Pfam Protein kinase domain 461 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02124 766 SUPERFAMILY L domain-like 30 280 - -
Tsu04g02124 766 Gene3D Ribonuclease Inhibitor 27 189 IPR032675 -
Tsu04g02124 766 Gene3D Ribonuclease Inhibitor 190 286 IPR032675 -
Tsu04g02124 766 MobiDBLite consensus disorder prediction 621 649 - -
Tsu04g02124 766 MobiDBLite consensus disorder prediction 361 440 - -
Tsu04g02124 766 MobiDBLite consensus disorder prediction 388 402 - -
Tsu04g02124 766 ProSiteProfiles Protein kinase domain profile. 455 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02124 Tsu-Chr4 23472491 23475851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02124 19 766 Receptor kinase-like Gene Family AT4G37250 57.345 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu04g02124 Pkinase 4.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02124 - - gmx:100784503 1115.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02124 04 23472491 23475851 Tsu04g02124 04 23472491 23475851 ECH