Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02111 ATGCATAGTTTAATAACACTCTTCTATCTCTTCTTTTACTTCACCTTCACATTTTCTTCCTCTACAAACTCCACCCTCCATCAAGACGCAGTATCTCTACTGTCTTTTAAGCAATACGCAGACCAAAACAACAAACTCCTCTACACGTTAAATGAACCTTACGACTATTGCGAATGGCAAGGAGTTAAATGCGCACAAGGTAGAGTAGTACGCTATGTTGTTCAAGGCTTAAATCTTCACGGTTTTTTCTCTCCAGACACTCTAACCCGGCTGGACCAACTCCGAGTCATGAGTCTCCGTAATAACTCATTGTTTGGACCCATTCCGGATCTATCACCACTCGTTAATCTCAAATCACTATTTCTTGACCATAATAATTTCTCCGGTTCATTTCCTCCTTCTATTATTTTCCTCCATAGGCTCATTACTCTATCGCTCTCTCATAATAACTTCACTGGTTTACTTCCGGTTCAATTAACTCTCCTCGACCGTCTCATTATACTTCGGCTTGACTCTAACTCTTTCACCGGTCCTCTTCCCTCTCTCAATCAAACCGGTCTAAAAGTGTTTAACGTATCCGCCAACAATCTCACCGGTCCAGTTCCTGTAACAGAGACTCTTTCCAGATTTAAACCGGCTTTGTTTTCAGAAAATCCAGGTCTATGTGGTGAAATTATTCACAAACAATGCGCTCATCGTTCTAGATTCTTCGGTTCAAATGCCACCGCGCCGTTGAGTCAGAGCGAGGAATCACAAGGAATTGTGGTGGTTCCATCTTCTTCCAAGAACGAAAAAAATCACAAGAAAACCGGTTTGATTCTCGGTTTCACTGTAACTGTTGCGATTATCGCTGTTTTTACAGTTATTGCAATAGCATTGATAAAAAAGCAGAACACTAGAGGAAAATCTAAGTCACCGGAAACGGAAACGGAAAATCCACCGGCGGCGGTAATGGAAGTGAGAACTGAAGTTCAAACAGACACGAAGGTGAAGAAGATGGAGGAAGCTCACCGGAGTGGGAAGTTAGTGTTCTGCTGTGGGGAGGTGCAGGATTATACGCTGGAGCAGCTGATGAGAGCTTCGGCGGAGCTTTTGGGAAGAGGGAGTGTGGGGACCACTTATAAGGCGGTGATGGATTCACAGTTGATATTAACGGTGAAGAGGTTGGACGCCGGAAAAACTGGTGTGACGAGTGGCGAGGTTTTTCAAAAGCATATGGAGATTGTTGGTAGACTTCGTCACcctaatttggttactttgaaGGCTTTTTTTCAAGCTAAAGGAGAGAGGCTTATTATCTATGATTATCAACCTAATGGAAGTCTCTTCAATCTAATTCATGGTTCAAGATCGGCGAGAGCGAAGCCACTGCATTGGACATCATGCTTAAAAATAGCAGAAGATGTAGCTCATGGACTTGCTTATATACATCAAGTTTCGTCTTTGATTCATGGCAACCTAAAATCCTCTAATGTCCTTCTTGGAGGTGACTTTGAAGCTTGTGTAACCGACTATTGTTTGGCCTTCCTTACAGATTCTTCATTTACAGAAGATCCTGATGTTGTAGCCTATAAAGCGCCAGAGGTTCGAAAATCTAACCGCAGGGCGACTTCAAAGTCTGATGTGTATGCTTTTGGTGTGTTGCTGTTGGAGCTTTTGACAGGCAAACATCCTTCCAAACACCCTTTCCTTGCGCCAACGGATTTGCAAGATTGGGTTAGAGCAATGAGGGACGATGATGTTAGTGAAGATAACCGGCTACAAATGCTCACCGAGGTTGCCAGTATTTGCAGTGCAACTTCCCCCGAGCAGAGGCCGGCTATGTGGCAAGTTCTTAAGATGATACAAGGAATAAAAGATAGTGTTTCAATGGAGGACATTGCACCGACTGGACTGTCATAG 1902 0.4311 MHSLITLFYLFFYFTFTFSSSTNSTLHQDAVSLLSFKQYADQNNKLLYTLNEPYDYCEWQGVKCAQGRVVRYVVQGLNLHGFFSPDTLTRLDQLRVMSLRNNSLFGPIPDLSPLVNLKSLFLDHNNFSGSFPPSIIFLHRLITLSLSHNNFTGLLPVQLTLLDRLIILRLDSNSFTGPLPSLNQTGLKVFNVSANNLTGPVPVTETLSRFKPALFSENPGLCGEIIHKQCAHRSRFFGSNATAPLSQSEESQGIVVVPSSSKNEKNHKKTGLILGFTVTVAIIAVFTVIAIALIKKQNTRGKSKSPETETENPPAAVMEVRTEVQTDTKVKKMEEAHRSGKLVFCCGEVQDYTLEQLMRASAELLGRGSVGTTYKAVMDSQLILTVKRLDAGKTGVTSGEVFQKHMEIVGRLRHPNLVTLKAFFQAKGERLIIYDYQPNGSLFNLIHGSRSARAKPLHWTSCLKIAEDVAHGLAYIHQVSSLIHGNLKSSNVLLGGDFEACVTDYCLAFLTDSSFTEDPDVVAYKAPEVRKSNRRATSKSDVYAFGVLLLELLTGKHPSKHPFLAPTDLQDWVRAMRDDDVSEDNRLQMLTEVASICSATSPEQRPAMWQVLKMIQGIKDSVSMEDIAPTGLS 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02111 633 PANTHER LRR RECEPTOR-LIKE KINASE 4 629 - -
Tsu04g02111 633 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 4 629 - -
Tsu04g02111 633 ProSiteProfiles Protein kinase domain profile. 359 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02111 633 Gene3D Ribonuclease Inhibitor 26 184 IPR032675 -
Tsu04g02111 633 Gene3D Ribonuclease Inhibitor 185 233 IPR032675 -
Tsu04g02111 633 Pfam Protein kinase domain 362 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g02111 633 Gene3D Phosphorylase Kinase; domain 1 323 436 - -
Tsu04g02111 633 SUPERFAMILY Protein kinase-like (PK-like) 363 620 IPR011009 -
Tsu04g02111 633 Gene3D Transferase(Phosphotransferase) domain 1 438 628 - -
Tsu04g02111 633 SUPERFAMILY L domain-like 26 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02111 Tsu-Chr4 23339819 23343424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02111 23 626 Receptor kinase-like Gene Family AT3G50230 54.732 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu04g02111 Pkinase 1.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02111 - - gmx:100783086 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02111 04 23339819 23343424 Tsu04g02111 04 23339819 23343424 ECH