Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02110 ATGGAAACATCATCGGAAAATTGCTCTGTTAAAGTTGCTCTTCACATTCGTCCACTCATTTCCGATGAAAAACAACAAGGTTGCACTCAATGTGTTTCAGTTTACCCTGGAAAACCTCAGGTTCAAATTGGGTCTCATTCCTTTACATTTGATCATGTTTATGGAAATGGAGGATCACCATCATCTAAAATGTTTGAGGAATGTGTTGCTCCATTGGTTGATGGGTTATTCCAAGGGTACAATGCTACTGTACTTGCTTATGGACAGACAGGATCCGGGAAAACGTATACCATGGGAACTGCATACAATGACAATAGTGGGATTGGGTTAATTCCTCAGGTTATGAATGCCTTGTTCAACAAGATTGAAACTCTAAAGCATCAAACAGAATTTCAGTTGCATGTTTCCTTCATCGAGattttgaaaGAAGAGGTAAGGGACTTGCTGGATATGGTATCTATGGGCAAATCAGATAACTCTAGCTCTAATGGCCATTCTGGAAAAGTAACTATTCCTGGGAAATCACCGATACAAATTCGTGAATCATCAAGTGGAGTAATAACACTGGCAGGGTCAACTGAAGTTTCTGTAAGTACATTACAGGAGATGGCTGCTTACTTGGAGCAGGGCTCTTTAAATAGGGCAACCGGAAGTACAAATATGAACAACCAATCCAGTCGATCACATGCCATCTTCACAATTACATTAGAACAGATGCGCAAACTCCATTCATTCTCTCCCAGCAATGACACTTCGGATGAGGATATGGGTGAGGAATACCTTTCAGCAAAGCTCCATTTGGTAGATCTAGCTGGATCTGAGCGAGCTAAAAGAACTGGTTCTGATGGCATTCGTTTAAAAGAAGGTATACACATCAATAGAGGTCTTCTTGCACTTGGCAATGTCATAAGTGCACTAGGGGATGAGAAAAAGCGAAAGGAGGGTGTACATGTCCCTTATCGGGATAGCAAACTCACTCGACTGTTACAGGATTCACTTGGTGGAAACAGCAGAACTGTCATGATAGCTTGCATTAGCCCTGCTGACATCAATGCTGAGGAAACTCTTAATACCCTTAAGTATGCAAATCGTGCACGCAACATTCAAAATAAGCCTGTTGCTAATCGAGATTTGATATCCAATGAGATGCAGCAAATGCGTCAGCAGTTAAAGTACTTGCAAGCTGAGCTCTGTTCTCGAGGAGGAGGTTCGGTTGATGAAATGCGGGTTCTTAAGGAAAGGATTACTTGGCTTGAGGAAACTAACGAGGAACTCTGTCGAGAACTTCATAAATACCGCAGCAGATGTTCTTTTGTAGAAAGATGCGATATTGACGAAACAGATGGACATATTTATCTCATGAAAAATGATGGGCTCGAGAGGTGCTTTCAGAGCTCAGAGTTATCTTACCGTCTAGTGGCTGGAAGTTTGTCAGGTCAGGATTCAAGGGAAGATGATGAAGTAGAAAAAGAGTTGGAGCATACACTACTGCTAAATACCATGGATAAAGAGATGCACGAGTTAAATAAGCGATTGGAGCAGAAAGAgACTGAGATGAAGCTCGTGGGAGGTGATACTGATGCACTCAGGCAACACTTTGGAAAGAAAATTATGGAACTCGaggaagagaaaagaaaagtgCAGCAAGAAAGGGACCGATTGTTGCACGAAGTAGAGAATCTAGCAGTTAATTCAAATGGACTGGCACATAAAACACAAGATGTTCGTGGCCAAAAATTGAAAGCATTGGAAGCACAGatTTTAGACCTcaagaagaaacaagaaaatcAGGTTCAGCTACTAAAGCAAAAGGAGAAGAGTGAAGAAGCTGCCAAAAGACTGCAAGCTGAGATACAGTATATCAAGGCTCAAAAGGTTCAGTTGCAGCATAAAATAAAGCAAGAGGCAGAACAGTTTCGACAATGGAAAGCTTCCCGTGAAAAGGAGTTACTCCAGTTGAAAAAGGAGGGAAGAAGAAATGAGTATGAAAGACATAAACTTGAGGCTCTAAACCAGCGCCAGAAAATGGTTCTTCATAGAAAGACAGAGGAAGCAACAATGGCTACTAAAAGGCTAAAAGAACTGTTGGAAGCCCGCAAATCTTCTCCGCGTGACCACTCTGGTTATTCAAATGGACATCTACAGCCTGGGCAGATCAATGAAAAATCCCTCCAGAGGTGGCTTGACCAGGAGCTGGAGGTAATGGTACACGTGCATGAAGTTCGTGCCGAATTTGACAAACAGAACCAAGTtcatACTGCACTAGAAGAAGAATTGGCTTTCCTGAAACAAGTGGATCAGTTTTCAGATAGGCAGAGTATCCCCACAGGAAATAGCCGATATTCAagACTGTTATCCATGTCACCAGATGCAAAAGTTGCGAGAATAGCTTCTCTTGAGAACATGCTGAGCATGTCTTCAGTTGCTTTGAAAGCCATGACTTCACAACTTACTGAGGCAGAAGAAAGGGAACGTGCATTAAATAACCGCGGACGTTGGAATCAATTACGCTCAATGGGAGAGGCGAAGAATGTGCTTCAGTATTTGTTCCATGCTACAGCAGAAGCAAGATGCCAATTGTGGGAAAAGAATATGGAACTGAAGGACTTAAAAGAGCAACTTAATGAGCTTGTAACACTACTAAAACAAAGTGAAGCACAGAGAAAGGAGCTTGTAAAAGAGATAGCGATTGGTGAACAAGCAGTTGCCATCTTGAACACACCAGCATCGGTGAGATTTTTACTCATTTTATCGCAATTAACATAA 2766 0.4118 METSSENCSVKVALHIRPLISDEKQQGCTQCVSVYPGKPQVQIGSHSFTFDHVYGNGGSPSSKMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTAYNDNSGIGLIPQVMNALFNKIETLKHQTEFQLHVSFIEILKEEVRDLLDMVSMGKSDNSSSNGHSGKVTIPGKSPIQIRESSSGVITLAGSTEVSVSTLQEMAAYLEQGSLNRATGSTNMNNQSSRSHAIFTITLEQMRKLHSFSPSNDTSDEDMGEEYLSAKLHLVDLAGSERAKRTGSDGIRLKEGIHINRGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVANRDLISNEMQQMRQQLKYLQAELCSRGGGSVDEMRVLKERITWLEETNEELCRELHKYRSRCSFVERCDIDETDGHIYLMKNDGLERCFQSSELSYRLVAGSLSGQDSREDDEVEKELEHTLLLNTMDKEMHELNKRLEQKETEMKLVGGDTDALRQHFGKKIMELEEEKRKVQQERDRLLHEVENLAVNSNGLAHKTQDVRGQKLKALEAQILDLKKKQENQVQLLKQKEKSEEAAKRLQAEIQYIKAQKVQLQHKIKQEAEQFRQWKASREKELLQLKKEGRRNEYERHKLEALNQRQKMVLHRKTEEATMATKRLKELLEARKSSPRDHSGYSNGHLQPGQINEKSLQRWLDQELEVMVHVHEVRAEFDKQNQVHTALEEELAFLKQVDQFSDRQSIPTGNSRYSRLLSMSPDAKVARIASLENMLSMSSVALKAMTSQLTEAEERERALNNRGRWNQLRSMGEAKNVLQYLFHATAEARCQLWEKNMELKDLKEQLNELVTLLKQSEAQRKELVKEIAIGEQAVAILNTPASVRFLLILSQLT 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02110 921 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 398 IPR027417 -
Tsu04g02110 921 Coils Coil 530 564 - -
Tsu04g02110 921 PRINTS Kinesin heavy chain signature 264 282 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g02110 921 PRINTS Kinesin heavy chain signature 318 339 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g02110 921 PRINTS Kinesin heavy chain signature 219 236 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g02110 921 PRINTS Kinesin heavy chain signature 79 100 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g02110 921 Pfam Kinesin motor domain 16 368 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g02110 921 Coils Coil 860 901 - -
Tsu04g02110 921 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 2 909 - -
Tsu04g02110 921 MobiDBLite consensus disorder prediction 156 175 - -
Tsu04g02110 921 ProSiteProfiles Kinesin motor domain profile. 9 368 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g02110 921 ProSitePatterns Kinesin motor domain signature. 263 274 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu04g02110 921 Coils Coil 580 631 - -
Tsu04g02110 921 Coils Coil 498 518 - -
Tsu04g02110 921 Gene3D Kinesin motor domain 1 396 IPR036961 -
Tsu04g02110 921 SMART kinesin_4 7 376 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu04g02110 921 Coils Coil 810 830 - -
Tsu04g02110 921 Coils Coil 376 396 - -
Tsu04g02110 921 Coils Coil 408 428 - -
Tsu04g02110 921 Coils Coil 738 758 - -
Tsu04g02110 921 CDD KISc_KIF4 8 369 - -
Tsu04g02110 921 PANTHER KINESIN-LIKE PROTEIN KIN-4B 2 909 - -
Tsu04g02110 921 Coils Coil 678 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02110 Tsu-Chr4 23328293 23337670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02110 10 401 Calmodulin-binding Proteins AT5G65930 34.091 2.93e-54 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02110 - - gmx:100790341 1521.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02110 04 23328293 23337670 Tsu04g02110 04 23328293 23337670 ECH