Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02099 ATGGCATCCATCAAACTCATATCAACCACTACAATTCAAGCACCTAGTCACATTAACACCAACTCAACACAAAAAATCCATTTGACTCCATGGGACCTCTCATCACTCCAAGTTGAAATGAACCAAAAAGGACTTCTCTTTCACAATGATCCACAAAACCCAAAAGACACATCAAACCAAATCCAACATCTCAAAAACTCACTTTCCTCAACTCTTGCTTTCTTCCCACCCCTTACAGGTCGTCTCATTATTAATCGTCAGGACGACGACAAGAACAATGACAAAAACTCATGTTTCATTCTTTGCAACAACCTAGGTgctttatttatccatgcaaTAGCTGAAAATACAAGTGTTTCTGACATTCTTAAACCAAACTATGTTCCTTCCATTGTTCACTCTTTTTTTCCATTCAATAATGTCAAAAACTATGAAGGCACATCAAAACCATTGCTTGCAATTCAAGTTACTGAGCTGATTGatggtatctttattggattcTCAATCAATCATGTCGTCGTTGATGGTAAGTCGTTTTGGCATTTCATTAATTCATGGGCTGAAATTTCGCGTGGTTTTGATCAACCATCGAAACTCCCTACACTTAATCGTTGGTTTTTCGATGATGCAATTGAAATTCCTATAAAATTTCCTTTCACAATAGAGGAAAACCTAAAAAGTTcccaaattgatgaaatttCCATTCCTCCTGAGAGGATTTTCCATTTCACAAAGGAGAAAATTGCGAAACTCAAATCGAAAGCTAATGAAGAGGCTAATACAAACAAAATATCTTCTCTACAAGCACTTTTAACTCACCTTTGGCGAGCTGTGATTCGTTGTCAGAATATCGACTCTGAAGAAGAAATCATGTATTGTTTAGTCATTGATGTTAGAGGCAGAGTTGATCCGCCGTTGCCCGAGAATTACTTTGGAAATGCATTACAAGTTGGGGGTGTGAAAGTGAAAGCAAAGGAATTACTTGTTGAAGGGGGGTTTGGAAAAATTGCTTTTGAGATGAACAAAATGATAGGTTCACATTCTGGTGATACTGTGaagagaaattatgaaaattgGGTGAAAAATCCAATGTTATTTCAAGGTAGGCTTAGTAATGTTAAGGCTTTGGCAACTAGTAGTTCTCCAAGGTTCAATGTTTATGGTAATGACTTTGGTTGGGGTAAGCCTGTGGCTGTTAGAAGTGGGGGTGCAAATAAAAGTAATGGAACTATAACTATGTTTagtggagaagaagaaggtagtatTGATATTGAAGTTTGTCTTTCTTATGATATTTTGGAGGCTATGGGAAATGATCTTGAATTCATAGATATATGTTCTAATTAG 1347 0.3437 MASIKLISTTTIQAPSHINTNSTQKIHLTPWDLSSLQVEMNQKGLLFHNDPQNPKDTSNQIQHLKNSLSSTLAFFPPLTGRLIINRQDDDKNNDKNSCFILCNNLGALFIHAIAENTSVSDILKPNYVPSIVHSFFPFNNVKNYEGTSKPLLAIQVTELIDGIFIGFSINHVVVDGKSFWHFINSWAEISRGFDQPSKLPTLNRWFFDDAIEIPIKFPFTIEENLKSSQIDEISIPPERIFHFTKEKIAKLKSKANEEANTNKISSLQALLTHLWRAVIRCQNIDSEEEIMYCLVIDVRGRVDPPLPENYFGNALQVGGVKVKAKELLVEGGFGKIAFEMNKMIGSHSGDTVKRNYENWVKNPMLFQGRLSNVKALATSSSPRFNVYGNDFGWGKPVAVRSGGANKSNGTITMFSGEEEGSIDIEVCLSYDILEAMGNDLEFIDICSN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02099 448 Pfam Transferase family 3 441 - -
Tsu04g02099 448 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 445 - -
Tsu04g02099 448 Gene3D - 2 211 IPR023213 -
Tsu04g02099 448 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 445 - -
Tsu04g02099 448 Gene3D - 237 441 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02099 Tsu-Chr4 23213988 23215334 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02099 62 428 Monolignol Biosynthesis Gene Families AT5G48930 27.763 2.38e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02099 - - gmx:100500257 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02099 04 23213988 23215334 Tsu04g02099 04 23213988 23215334 ECH