Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02092 ATGGCTGCAAATAATGAAGAGAAACAGCAAAACAAACCCATTGGACTCATTGATCTCTCTCACAAGACTCTCCTTCAGAGTGATGCACTATATCAGTATATACTTGAAACAAGTGTGTTTCCAAGAGAGCATCCATGTTTGAAGGAGCTTCGTGAGATGACAGATAAACACCCTCGGAACCTTATGGCTACACCTGCTGATGAAGGACAATTTATAAGCATGTTGATTAAGCTCATAAATGCAAAGAATACTATGGAAATTGGTGTGTACACAGGTTACTCTTTACTATCTACCGCTCTTGCTCTTCCCTCTGATGGAAAGGTATTGGCTTTGGACGTGAATCGTCAATACTATGAGTTGGGATTGCCCATAATTGAAAAAGCTGGTGTGGCTCATAAGATTGACTTTAGAGAAGGAACCGCTCTCCCTCTTCTTGACGAACTCCTTCAAGATGAAAACAACAAGGGAACATTTGACTTTATTTTCGTGGATGCCGATAAGAATAACTATTTAAACTATCACAAGAAGGTTATTGATCTTGTGAAAGTCGGGGGATTAATTGGATACGATAACACCTTATGGAGTGGATCTGTAGCGGCTCCACCTGATGCACCTATGTTGGATTACGTTAGTGAGTTGCGTGACCATGTGATTGAATTCAACAAGTATCTAGCTCAAGATTCAAGGATCGAGATTTGTCAACTCCCAGTAGGTGATGGGATTACCTTATGTCGCCGCATCAATTGA 747 0.4083 MAANNEEKQQNKPIGLIDLSHKTLLQSDALYQYILETSVFPREHPCLKELREMTDKHPRNLMATPADEGQFISMLIKLINAKNTMEIGVYTGYSLLSTALALPSDGKVLALDVNRQYYELGLPIIEKAGVAHKIDFREGTALPLLDELLQDENNKGTFDFIFVDADKNNYLNYHKKVIDLVKVGGLIGYDNTLWSGSVAAPPDAPMLDYVSELRDHVIEFNKYLAQDSRIEICQLPVGDGITLCRRIN 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02092 248 Pfam O-methyltransferase 37 247 IPR002935 GO:0008171
Tsu04g02092 248 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 1 247 - -
Tsu04g02092 248 PANTHER O-METHYLTRANSFERASE-RELATED 1 247 - -
Tsu04g02092 248 Gene3D Vaccinia Virus protein VP39 15 248 IPR029063 -
Tsu04g02092 248 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 246 IPR029063 -
Tsu04g02092 248 CDD AdoMet_MTases 86 187 - -
Tsu04g02092 248 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 23 247 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02092 Tsu-Chr4 23153732 23157820 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02092 4 248 Monolignol Biosynthesis Gene Families AT4G34050 73.061 1.34e-135 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02092 K00588 - gmx:100305498 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02092 04 23153732 23157820 Tsu04g02092 04 23153732 23157820 ECH