Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02090 ATGGCTTTTATTAATaatgaagaaaaacaacaaaaccaacCCATTCTATACAAAGATATTGCTCACAAGACTCTCCTTCAGAGTGATGCACTTTATCATTATGTACTTGAAACCAGTGTGTTTCCAAGAGAGCACCCATGTTTGAAGGAACTCCGTGATATGACAGAAAAACACCCTCGGAGCCATATGGCTACAGCCGCCGATGAAGGGCAACTTATAAGCATGTTGGTTAAGCTGATAAATGCAAAGAACACAATGGAAATTGGTGTGTACACTGGTTACTCTCTGCTTTCTACTGCTCTTGCTCTTCCCTCCGATGGAAAGGTAGTGGCTTTGGACATTAATCGTGAATACTATGAGTTGGGATTGCCTATGATTGAAAAAGCTGGAGTAATTCACAAGATTGACTTTAGAGAAGGACCTGCTCTTCTTTTTCTTGACCAACTTCTTCAAGATGAAAATAATAAGGGgacatttgattttgtttttgtggaTGCTGATAAGAATAATTACTTAAACTATCATAAAAGGGTGATTGATCTTGTAAAAGTTGGGGGATTAATTGGGTATGATAACACCTTATGGAGTGGATCAGTTGCGCTTCCACCCGATGCACCTATGTTGGCGATCATTAGAGATTTACGTGGTCATGTGATTGAGGTGAATAAGTATCTAGCACAAGATTCAAGAATCGAAATTTGTCAACTCACACTAAGTGATGGAATTACCCTTTGCCGCCGCATTAGTTGA 750 0.3733 MAFINNEEKQQNQPILYKDIAHKTLLQSDALYHYVLETSVFPREHPCLKELRDMTEKHPRSHMATAADEGQLISMLVKLINAKNTMEIGVYTGYSLLSTALALPSDGKVVALDINREYYELGLPMIEKAGVIHKIDFREGPALLFLDQLLQDENNKGTFDFVFVDADKNNYLNYHKRVIDLVKVGGLIGYDNTLWSGSVALPPDAPMLAIIRDLRGHVIEVNKYLAQDSRIEICQLTLSDGITLCRRIS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02090 249 Pfam O-methyltransferase 38 248 IPR002935 GO:0008171
Tsu04g02090 249 PANTHER O-METHYLTRANSFERASE-RELATED 5 248 - -
Tsu04g02090 249 CDD AdoMet_MTases 87 188 - -
Tsu04g02090 249 Gene3D Vaccinia Virus protein VP39 14 249 IPR029063 -
Tsu04g02090 249 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 24 248 IPR002935 GO:0008171
Tsu04g02090 249 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 5 248 - -
Tsu04g02090 249 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 28 247 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02090 Tsu-Chr4 23107074 23130234 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02090 5 249 Monolignol Biosynthesis Gene Families AT4G34050 67.347 9.35e-128 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02090 K00588 - gmx:100305498 391.734