Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02089 ATGGATATTTATATTACTAAGGAAGAGAAAGAGCAAAACACACCCATTCCATATAGAGATGTTGGTCACAAGTCTCTACTTCAGAGTGATGCACTTTATGATTATATACTTGAAACTAGTGTATTTCCAAGAGAGCATCCATGTTTGAAGGAGCTCCGTGAGGTGACAGATAACCATCCATTGAACCTTATGGCTACATCAGCTGATGAAGGGCAACTTTTAAGCTTGTTAATTAAGCTTATCAATGCAAAGAAGACAATGGAAATTGGTGTGTACACTGGTTACTCTCTGCTCTGCACTGCTCTTGCTCTTCCCTCTGATGGAAAGGTGTTGGCTTTGGACATTAGTCGTGAATACTATGAGGTTGGATTGCCTATGATTGAAAAAGCTGGAGTGGCTCACAAGATTGACTTTAGAGAAGGACAAGCTCTCCCTCTTCTTGACCAACTTATTCAAGATGAAAATAACAAGGGgacatttgattttatttttgtggatGCTGATAAGAATAACTACTTAAACTATCATAAGAGAGTGATTGACCTTGTGAAAGTTGGGGGATTGATCGGGTATGATAATACCTTATGGACTGGATCGGTTGCACTTCCAGATGATGCACCTATGTTGGAGTTCATTAGGGGTTATCGTGGTTATGTGATTGAGGTCAACAAGTATCTTGCTCAAGATTCAAGGATCGAGATTTGCCAACTCGCGGTTGGTGATGGAATTACCTTGTGTCGTCGCATCAGTTAA 753 0.3931 MDIYITKEEKEQNTPIPYRDVGHKSLLQSDALYDYILETSVFPREHPCLKELREVTDNHPLNLMATSADEGQLLSLLIKLINAKKTMEIGVYTGYSLLCTALALPSDGKVLALDISREYYEVGLPMIEKAGVAHKIDFREGQALPLLDQLIQDENNKGTFDFIFVDADKNNYLNYHKRVIDLVKVGGLIGYDNTLWTGSVALPDDAPMLEFIRGYRGYVIEVNKYLAQDSRIEICQLAVGDGITLCRRIS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02089 250 Gene3D Vaccinia Virus protein VP39 16 250 IPR029063 -
Tsu04g02089 250 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 8 249 - -
Tsu04g02089 250 PANTHER O-METHYLTRANSFERASE-RELATED 8 249 - -
Tsu04g02089 250 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 248 IPR029063 -
Tsu04g02089 250 Pfam O-methyltransferase 39 249 IPR002935 GO:0008171
Tsu04g02089 250 CDD AdoMet_MTases 88 189 - -
Tsu04g02089 250 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 25 249 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02089 Tsu-Chr4 23102509 23104171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02089 8 250 Monolignol Biosynthesis Gene Families AT4G34050 71.193 3.81e-132 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02089 K00588 - gmx:100305498 382.104