Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02075 ATGGAAAGCCAAGACCCACCAAACCCACCACCACCATTAATGATGCCgccgccaccaccaccacctcaaAACAACACTTTCTTCTTTACGCctttacaaaattaccctttGGAATCTCAAGATCAAGGTCTTGGTGATATTGATTGGGGTAATTTTTTCTTAGgtcaaaataataacaacttacTTGTTGGGGATACTAAGGAGACATTAATTGATAATATTCAATGcacatcttcttcttctaattTGTTGGTGAATAATAATGAAAGTGGGAGTTATCAATTGCATGAGGAAGAAAAACTAAACAAAGAGGAGAAAAGGGTTAAAGGTGGAAGATTGAAAAAGACTACAAAAGTACCAAGGTTTGCATTTCAGACAAGAAGTGTTGATGATATTTTGGATGATGGTTATCGTTGGAGGAAATATGGACAAAAAGCTGTCAAGAATAGCACATATCCCagAAGCTACTATCGATGCACGCATCACACTTGCAATGTGAAGAAACAAGTGCAAAGGCTATCCAAAGACACTAGCATTGTGGTGACTACATACGAGGGAATTCATAACCACCCATGCGAGAAGCTCATGGAAACCCTAACTCCTCTTCTAAAGCAAATACAATTTCTTGCTAGCTTGtaa 639 0.3349 MESQDPPNPPPPLMMPPPPPPPQNNTFFFTPLQNYPLESQDQGLGDIDWGNFFLGQNNNNLLVGDTKETLIDNIQCTSSSSNLLVNNNESGSYQLHEEEKLNKEEKRVKGGRLKKTTKVPRFAFQTRSVDDILDDGYRWRKYGQKAVKNSTYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLASL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02075 212 ProSiteProfiles WRKY domain profile. 128 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu04g02075 212 MobiDBLite consensus disorder prediction 1 25 - -
Tsu04g02075 212 SMART WRKY_cls 133 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu04g02075 212 SUPERFAMILY WRKY DNA-binding domain 127 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu04g02075 212 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 80 208 - -
Tsu04g02075 212 Gene3D WRKY domain 118 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu04g02075 212 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 80 208 IPR044810 GO:0003700
Tsu04g02075 212 Pfam WRKY DNA -binding domain 134 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02075 Tsu-Chr4 22854813 22858077 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02075 109 212 WRKY Transcription Factor Family AT5G41570 74.528 1.96e-56 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu04g02075 WRKY 2.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02075 - - cam:101497701 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02075 04 22854813 22858077 Tsu04g02075 04 22854813 22858077 ECH