Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02070 ATGAATCCTAAgtttgtattttcaattttcatcatTACTCCTTTGTTTCTATTAAGCATTCATAGCAACGCTGATACTTCCACATATATAATCCATATGAACAAATCTTTCTCTCCTAAAGTATTTACAACCCATCATGAATGGTTTAAATCCACCATTCATTCCTTAAAATCAAAAACATTACTACTTGATGATCATGATTATCAATCCCAATCACATAAGAAACTAGTTTACACCTATGATAATGCCATGTATGGCTTTAGTGCAGTGTTATCTTCAAATGAGTTGGAGACTCTTAACAACATTGATGGTTTTGTTGCAGCATATCAAGACAGAACTGCAACCATTGACACTACACATACCTTTGAATTTCTTTCCTTAGATTCTCCAAGTGGACTATGGCATGCTACAGATTTCGGAGACGATATCATTGTTGGTGTTATTGATTCTGGTGTTTGGCCAGAGAGTCAAAGCTTTAAAGATCATGGCATGACAAAGAAAATTCCAAACAAATGGAAAGGAACATGTGAATCTGGCCAAGAATTCAATACCTCTATGtgtaacttcaaattgattgGAGCTAGATATTTCAACAAAGGTGTCATTGCTTCAAATCCAAATCTTACAACAGTCTACATGAACTCGGCTAGAGATAATGTAGGACATGGAACTCACACATCATCAACTGTTGCagGTAACTATGTTAATGGAGCTTCTTATTTTGGTTATGCCAAAGGAGTAGCAAGAGGCATTGCACCAAAAGCTAGGCTTGCCATGTACAAAGTGATTTGGGAAGAGGGTCTTTTAGCTTCTGATGTTTTGGCCGGAATGGACCAAGCAATTATTGATGGTGTTGATGTGATATCAATTTCAATGGGATTTGATGATGCTCCAATTTATGAAGATCCTATAGCAATAGCTTCATTTGCAGCTATGGAAAAAGGGATTGTTGTTTCATCTTCTGCAGGTAACTCAGGACCTGACCTTGGAACCTTGCACAATGGTATCCCTTGGCTCATTACTGTTGCTGCAGGCACAATTGATAGAACCTTTGGAACTCTTGTTTTGGGAAATGGTCAAAACATTATTGGTTGGACTTTGTTTCCATCAAATGCTACTATAGTTGAAAATCTTCCACTTATTCACAATAACACTTTATCTTCATGCAACTCAATGAAACTCTTATCTCAACTTTACAAACAAGCCATCATTCTTTGTGATGATGACTCAATATCAGACCCAAGATCAGTGTTTGACCAAATCAATCTCGTCGCAGAAACAGGTGTGTTAGGAGCAATTTTTGTCTCAGATAATCCTGATTTAATTGATTTAGGAAATGTTTACTCTCCAATTATTGTAATCAAGCCAAAAGATGCAGAATCTGTGATCAAATAtgcaaaaagaaacaaaaatccaACAGCAAGCATTAAGTTTCAACAAACATTTGTTGGAATAAACCCAGCACCAGCTGCAGCACATTACTCATCAAGAGGTCCTTCACATTACTTTCCGTGGATTTTGAAGCCTGACGTAATGGCACCTGGTTCTAGAGTTCTTGCAGCTTATGTTCCTACTAAACCATCGGCTAGAATCGGCACAAATAATTACTTAGCAAGTGACTACAATTTCATGTCAGGAACATCCATGTCTTGTCCTCATGTTTCAGGTGTTGCGGCTCTTCTCAAATCAGCACATCCTGAATGGAGTGCTGCTGCTATAAGATCTGCATTAGTAACCACAGCTAATCCGATGGATAATACACAAAATCCTATACGGGATAATGCATACCCTTCTCAACATGCTTCTCCGCTAGCTATTGGTGCGGGTGAGATTGATCCTAATAGAGCAATGAATCCAGGTTTGGTATATGATGCTACACCACAAGACTATGTTAATCTTCTTTGTGCATTGAAGTTCACAAAGAAGCAAATTTTAACAATTACAAGATCAACTTCTTATGATTGTGAAAACCCGTCTTTCGATCTTAATTACCCTTCATTTATAGCATTATACAGCAACAAAACAACATCAATGGTTCACAAATTTAAGAGAACTGTTACCAATGTTGGATATGGTGCTGCTACATATAAAGCTAAAGTGACACAACCCAAAGatggtggaacacaCACTGTTAGAAGTCCTATTGTAGTTGCACCAAGTgaaattgtgaaattttaa 2178 0.36 MNPKFVFSIFIITPLFLLSIHSNADTSTYIIHMNKSFSPKVFTTHHEWFKSTIHSLKSKTLLLDDHDYQSQSHKKLVYTYDNAMYGFSAVLSSNELETLNNIDGFVAAYQDRTATIDTTHTFEFLSLDSPSGLWHATDFGDDIIVGVIDSGVWPESQSFKDHGMTKKIPNKWKGTCESGQEFNTSMCNFKLIGARYFNKGVIASNPNLTTVYMNSARDNVGHGTHTSSTVAGNYVNGASYFGYAKGVARGIAPKARLAMYKVIWEEGLLASDVLAGMDQAIIDGVDVISISMGFDDAPIYEDPIAIASFAAMEKGIVVSSSAGNSGPDLGTLHNGIPWLITVAAGTIDRTFGTLVLGNGQNIIGWTLFPSNATIVENLPLIHNNTLSSCNSMKLLSQLYKQAIILCDDDSISDPRSVFDQINLVAETGVLGAIFVSDNPDLIDLGNVYSPIIVIKPKDAESVIKYAKRNKNPTASIKFQQTFVGINPAPAAAHYSSRGPSHYFPWILKPDVMAPGSRVLAAYVPTKPSARIGTNNYLASDYNFMSGTSMSCPHVSGVAALLKSAHPEWSAAAIRSALVTTANPMDNTQNPIRDNAYPSQHASPLAIGAGEIDPNRAMNPGLVYDATPQDYVNLLCALKFTKKQILTITRSTSYDCENPSFDLNYPSFIALYSNKTTSMVHKFKRTVTNVGYGAATYKAKVTQPKDGGTHTVRSPIVVAPSEIVKF 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02070 725 Pfam Fibronectin type-III domain 661 704 IPR041469 -
Tsu04g02070 725 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 116 IPR037045 -
Tsu04g02070 725 Pfam Subtilase family 140 594 IPR000209 GO:0006508|GO:0008236
Tsu04g02070 725 CDD PA_subtilisin_like 353 476 - -
Tsu04g02070 725 Gene3D - 348 483 - -
Tsu04g02070 725 PANTHER OS01G0868800 PROTEIN 29 709 - -
Tsu04g02070 725 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
Tsu04g02070 725 SUPERFAMILY Subtilisin-like 117 621 IPR036852 GO:0004252|GO:0006508
Tsu04g02070 725 Pfam Peptidase inhibitor I9 28 114 IPR010259 -
Tsu04g02070 725 ProSiteProfiles Serine proteases, subtilase domain profile. 121 617 - -
Tsu04g02070 725 Gene3D - 634 706 - -
Tsu04g02070 725 Gene3D Peptidase S8/S53 domain 142 630 IPR036852 GO:0004252|GO:0006508
Tsu04g02070 725 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 709 IPR045051 -
Tsu04g02070 725 CDD Peptidases_S8_3 115 582 IPR034197 -
Tsu04g02070 725 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Tsu04g02070 725 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Tsu04g02070 725 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02070 Tsu-Chr4 22759198 22761808 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02070 15 700 Subtilisin-like Serine Gene Family AT2G05920 42.150 9.23e-172 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02070 - - gmx:100779169 1035.4