Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02069 ATGGAGCTTAAGTTTATGTTTTCAATTCTCCTCATTACTCCTTTCTTTCTAATAACATTTCATAGCAATGCTGAAACTTCCACATATATAATTCATATGAACAAATCCTTATTTCCTCAAATTTTCATAACTCATAATGATTGGTTCAAATCCACCATTCAATCCTTAAAGTCAAAAACACTACTACTTGATGATCAAGATCAACAAACACAGAAGAAACTATTGTACACCTATGATAATGCCATGTATGGATTTAGTGCATTGTTATCTTCAAATGAGTTAGAAACTCTTAAGAACATTGATGGCTTTGTTGCAGCATATCAAGACAGAACAGCTACAATTGACACAACTCACACCTTTGAATATCTCTCCCTAGATTCTCCAAATGGACTATGGCATGCTTCAAATTTCGGAGACGATATCGTTGTTGGTGTTATTGACTCTGGTGTGTGGCCAGAGAGTCAAAGCTTTAAAGATGATGGAATGACAAAGAAAATTCCTAACAAATGGAAAGGAACATGTGAAATTGGTCAAGAATTTAACACTTCAATGTGTAACTTCAAATTGGTTGGAGCTAGATATTTCAACAAAGGTGTTATTGCTTCAAATCCAAATGTTACCATCAGCATGAATTCAGCTAGAGACAGTATTGGACATGGAACACACACTTCATCCACTGTTGCAGGTAACTATGTTAATGGCGCGTCTTATTTTGGTTATGCAAAAGGAATAGCAAGAGGCATTGCACCAAAAGCTAAAATTGCAATGTACAAAGTACTTTGGGAAGAGGGTCGTTTCGCCTCGGATGTTTTGGCAGGAATAGACCAAGCAATTATTGATGGTGTTGATgtgatttcaatttcaatggGATTTGATGATACTCCACTTTATGAAGATCCTATAGCAATAGCTTCATTTGCAGCTATGGAAAAAGGGATTGTTGTTTCATCTTCTGCAGGTAACTCAGGACCTCAACTTGGAACCTTGCACAATGGTATCCCTTGGCTCATTACTGCAGCTGCAGGCACTATAGATAGAACTTTTGGTATTCTTGTTTTGGGAAATGGTCAAAACATTATTGGTTGGACTTTGTTTCCAGCAAATGCTATAGTTGAAAATCTTCCACTTGTTTACAATAACACTGTATCTTCATGCAATTCAGTGGAGCTCTTATCTCAACTTAAAAAACAAGTCATAATTCTTTGTGATGAATCAATGTCAAACTCAATCACAAACTCAGTGTTTAAACAAATCAGAGCTGTGACAACAACAAGTATGTTAGGGGCAGTTTTTATCTCTGATAATCCTAGTTTAATCGACACAGGAAATGTTTACTCACCCAGTATTGTAATCAAGCCGAAAGATGCAGAATATGTGATCAACTATGCAAAAAGCAATAAGAATCCTACAGCAAGCATTAAATTTCAACAAacatttgttggaacaaagccAGCACCAGCGGCAGCACATTACTCATCAAGAGGTCCTTCACATTACTTTCCATGGATTTTGAAACCTGACATAATGGCACCTGGCTCTAGAGTTCTTGCAGCTTATATTCCTACTAAACCATCAGCTAGAATCGGCACAAATGTGTTCTTATCAAATGACTACACTTTCATGTCAGGAACATCCATGTCTTGTCCTCATGTTTCAGGTGTTGTTGCTCTTTTGAAATCAGCACATCCAAAATGGAGTGCCGCGGCTATAAGATCGGCATTAATAACCACAGCTAGTCCTTTAGATAATACACAAAATCCTATAAGGGATAATGGTTATCCTTCTCAATATGCTTCACCGCTTGCTATTGGTGCCGGTGAGATTGATCCTAATAGAGCAATGAATCCAGGTTTGATATATGATGCTACACCACAAGACTATGTTAATCTTCTTTGTGGTTTGAAGTTCACAAAGAACCAAATTTTAACCATTACAAGATCAAATTCTTATGATTGTGAAAACCCTTCTTTGGATCTTAATTACCCTTCATTTATAGCATTCTATAGTAACAGAACAAGATCAATGGTTCACAAGTTTAAGAGGACTGTTACTAATGTTGGTGAAGGTGCTGCTACATATAGAGCTAAATTGACACATCCTAAAGGTTGTGTGGTGACAGTGTCACcagatatattaaattttagttaTATAAATGAGAAACAAAGTTACTACATTAACATAAAGTATGTTATGTACAATAAGGAAAATGTTTCATTTGGAGATCTTGTTTGGATTGAAGATAGTGGAGCACACACTGTTAGAAGTCCTATTGTAATAGCACCTAGTGGAATTATATGA 2298 0.3547 MELKFMFSILLITPFFLITFHSNAETSTYIIHMNKSLFPQIFITHNDWFKSTIQSLKSKTLLLDDQDQQTQKKLLYTYDNAMYGFSALLSSNELETLKNIDGFVAAYQDRTATIDTTHTFEYLSLDSPNGLWHASNFGDDIVVGVIDSGVWPESQSFKDDGMTKKIPNKWKGTCEIGQEFNTSMCNFKLVGARYFNKGVIASNPNVTISMNSARDSIGHGTHTSSTVAGNYVNGASYFGYAKGIARGIAPKAKIAMYKVLWEEGRFASDVLAGIDQAIIDGVDVISISMGFDDTPLYEDPIAIASFAAMEKGIVVSSSAGNSGPQLGTLHNGIPWLITAAAGTIDRTFGILVLGNGQNIIGWTLFPANAIVENLPLVYNNTVSSCNSVELLSQLKKQVIILCDESMSNSITNSVFKQIRAVTTTSMLGAVFISDNPSLIDTGNVYSPSIVIKPKDAEYVINYAKSNKNPTASIKFQQTFVGTKPAPAAAHYSSRGPSHYFPWILKPDIMAPGSRVLAAYIPTKPSARIGTNVFLSNDYTFMSGTSMSCPHVSGVVALLKSAHPKWSAAAIRSALITTASPLDNTQNPIRDNGYPSQYASPLAIGAGEIDPNRAMNPGLIYDATPQDYVNLLCGLKFTKNQILTITRSNSYDCENPSLDLNYPSFIAFYSNRTRSMVHKFKRTVTNVGEGAATYRAKLTHPKGCVVTVSPDILNFSYINEKQSYYINIKYVMYNKENVSFGDLVWIEDSGAHTVRSPIVIAPSGII 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02069 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Tsu04g02069 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 114 IPR037045 -
Tsu04g02069 765 CDD PA_subtilisin_like 351 473 - -
Tsu04g02069 765 Gene3D - 631 761 - -
Tsu04g02069 765 SUPERFAMILY Subtilisin-like 116 618 IPR036852 GO:0004252|GO:0006508
Tsu04g02069 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 760 IPR045051 -
Tsu04g02069 765 Gene3D - 345 480 - -
Tsu04g02069 765 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Tsu04g02069 765 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Tsu04g02069 765 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Tsu04g02069 765 ProSiteProfiles Serine proteases, subtilase domain profile. 117 614 - -
Tsu04g02069 765 Pfam Subtilase family 138 582 IPR000209 GO:0006508|GO:0008236
Tsu04g02069 765 PANTHER OS01G0868800 PROTEIN 28 760 - -
Tsu04g02069 765 Gene3D Peptidase S8/S53 domain 140 627 IPR036852 GO:0004252|GO:0006508
Tsu04g02069 765 CDD Peptidases_S8_3 113 579 IPR034197 -
Tsu04g02069 765 Pfam Fibronectin type-III domain 658 759 IPR041469 -
Tsu04g02069 765 Pfam Peptidase inhibitor I9 28 112 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02069 Tsu-Chr4 22749485 22752312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02069 9 762 Subtilisin-like Serine Gene Family AT5G67090 42.397 0.0 550