Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02055 ATGGCTTCTCATCTTACTCTTCTTCATGCTCCTCCTCTTTCAATTCCCACTAAAACCTTTCATTCCAAACATATTGCCATAAAACCACTCAAACCCACTTTAAattttccttcatcttcttcttctttctttcaatgTTCCTCAAAAACAACACATAGAGgatcttcttcatcattcattGCTTATTCATCATCAAATGGTAGAAGCTCTAACGATTCGGTGGATGATGCTGGTGTTAAGAGTGTGGAGCAACTTGTTGAAGAGAAAAAACGAGCTGAATTGTCTGCTAGAATTGCCTCAGGTGAATTCACTGTCAAACAGGAATCTGGTTTACCTTCAATATTAAAGAAGAGCTTGTCAAATTTTGGAGTGCCCAATGAAATTCTGGAATTTTTATTTGGCTTGTATCCTAAAATTCCTGAGGCAAAAGGGTCAATTAGTGCCATTCGAAGTGAGGCCTTTTTTATTCCATTGTATGAACTTTACATCACATATGGTGGCATTTTCAGATTGAATTTTGGACCAAAGTCATTTTTGATAGTATCGGATCCGGCTATTGCAAAACACATATTGAAAGACAATGCAAAGGGTTATTCTAAGGGCATCTTGGCTGAGATCCTTGATTTTGTAATGGGGAAAGGGCTTATCCCAGCTGATGGGGAAATATGGAAAGTTAGACGGCGTACTATAGTCCCAGCATTGCATCTGAAGTTTGTAGCAGCTATGATTGGCCTTTTTGGACAAGCTACAGATAGGCTCTGCAAGAAGCTAGATGCGGCTGCATCTGACGGAGAAGATGTTGAGATGGAGTCACTTTTCTCTCGATTGACGTTGGATATCATTGGCAAAGCAGTGTTCAATTATGATTTTGACAGTTTATCAAATGACACTGGTATAATTGAGGCTGTTTATACCGTACTGAGAGAAGCAGAAGATCGAAGTGTTTCGCCAATTCCAGTCTGGGATCTCCCAATATGGAAAGACATATCCCCACGTCAAAGGAAGGTTGCTGCAGCTTTGAAACTTGTCAACGATACACTTAACAATCTCATAGCAATATGCAAGAGAATGGTGGATGAAGAAGAGCTACAGTTTCATGAGGAGTACATGAATGAACAGGATCCAAGTATTCTGCACTTCTTATTGGCATCAGGAGATGATGTGACAAGTAAACAACTTCGTGATGACTTAATGACAATGCTAATTGCTGGACATGAAACATCAGCCGCTGTTTTAACTTGGAccttttatcttctttctaagGAGCCTAGTGTCATGTCCAAGCTCCAAGAAGAGGTTGACTCTGTACTTGGTGATCGGTTTCCAACTATTGAAGACATGAAAAAACTCAAATATACAACTCGAGTGATCAACGAGTCATTGAGGCTTTACCCTCAACCACCTGTGTTAATTCGTCGCTCTCTTGACAATGATGTTCTTGGAGAGTATCCTATAAAAAGAGGAGAAGATATCTTTATATCTGTCTGGAACCTGCATCGCAGTCCAACACTGTGGGATGGTGCTGATAAGTTTGATCCTGAAAGATGGCCGTTAGATGGACCTAACCCTAATGAGAcgaatcaaaacttcaaATATCTTCCATTTGGTGGAGGACCGCGAAAATGCATAGGGGATATGTTTGCTTCATATGAGacTATAGTAGCCCTTGCAATGCTTGTTAGACGGTTCAACTTTCAAATGGCAATTGGAGCTCCACCAGTTGTGATGACTACTGGAGCCACAATTCATACAACACAAGGGTTGAACATGACGGTAACACGCAGAACAAAACCTCCTATTGTGCCCTCATTACAGATGTCAACATTGGAAGTGGATCCATCCATAAGCATTTCTGATAAAGAGGAAATTGGTCAGAAAGACCAAGTTTATCAGGCTCAAAACTCCTGA 1908 0.3894 MASHLTLLHAPPLSIPTKTFHSKHIAIKPLKPTLNFPSSSSSFFQCSSKTTHRGSSSSFIAYSSSNGRSSNDSVDDAGVKSVEQLVEEKKRAELSARIASGEFTVKQESGLPSILKKSLSNFGVPNEILEFLFGLYPKIPEAKGSISAIRSEAFFIPLYELYITYGGIFRLNFGPKSFLIVSDPAIAKHILKDNAKGYSKGILAEILDFVMGKGLIPADGEIWKVRRRTIVPALHLKFVAAMIGLFGQATDRLCKKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIIEAVYTVLREAEDRSVSPIPVWDLPIWKDISPRQRKVAAALKLVNDTLNNLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVTSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVMSKLQEEVDSVLGDRFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLDNDVLGEYPIKRGEDIFISVWNLHRSPTLWDGADKFDPERWPLDGPNPNETNQNFKYLPFGGGPRKCIGDMFASYETIVALAMLVRRFNFQMAIGAPPVVMTTGATIHTTQGLNMTVTRRTKPPIVPSLQMSTLEVDPSISISDKEEIGQKDQVYQAQNS 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02055 635 Pfam Cytochrome P450 159 577 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02055 635 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 535 544 IPR017972 GO:0005506|GO:0016705
Tsu04g02055 635 Gene3D Cytochrome P450 137 604 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02055 635 PANTHER CYTOCHROME P450 FAMILY 4 137 599 - -
Tsu04g02055 635 Coils Coil 82 102 - -
Tsu04g02055 635 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02055 635 PRINTS P450 superfamily signature 533 542 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02055 635 PRINTS P450 superfamily signature 403 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02055 635 PRINTS P450 superfamily signature 542 553 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02055 635 PANTHER - 137 599 - -
Tsu04g02055 635 SUPERFAMILY Cytochrome P450 150 595 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02055 635 PRINTS E-class P450 group I signature 494 518 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02055 635 PRINTS E-class P450 group I signature 532 542 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02055 635 PRINTS E-class P450 group I signature 454 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02055 635 PRINTS E-class P450 group I signature 162 181 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02055 635 PRINTS E-class P450 group I signature 542 565 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02055 635 PRINTS E-class P450 group I signature 412 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02055 635 PRINTS E-class P450 group I signature 276 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu04g02055 635 PRINTS E-class P450 group I signature 392 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02055 Tsu-Chr4 22566552 22572416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02055 78 608 Cytochrome P450 AT1G31800 82.037 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02055 K15747 - gmx:100780770 1023.85