Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02017 ATGAGCTCCAAGGAGAAACCCACTCTCGGTGGCACGCGGATTAAGACCCGCAAACGGAACATTGCGGCGCCTCTGGACCCTGCAGCATTTGCGGATGCAGTGGTCCAGATTTACTTGGATAATGCTGGTGATTTGGAACTTATTGCAAAAAGCATTGAATCTTCTGACCTCAACTTCTCAAGATACGGTGACACCTTTTTTGAGGTTATTTTCACTGGGGGCCGCACACAACCTGGAACTACCAAGCCTGATGAGGGGGAACGCCATCCTTATTCCATAATAGAGTATGAGGCAAAACGTGAAGTCATTTTACCATCTGTGATCTACATACAGAAAGTTTTGCGTAGAAGGCCATTTCTCATCAAGAACCTTGAAAATGTTATGCGAAGGTTCCTTCAGTCCTTGGAGCTTTTTgaggaaaatgagaggaaaaagtTGGCAATCTTCACAGCACTTGCTTTTTCCCAGAAGTTATCTGGTCTCCCACCAGAGACTGTGTTCCAACcacttcttaaagataaccttGTTGCCAAAGGGCTAGTTCTGACATTTATAACGGACTTCTTTAAGGTGTATTTGAATGACAACAGCCTCGATGATCTTATTTCAATCCTGAAACGTGGGAAAATCGAGGACAATCTTCTGGTCTTTTTTCCCCCTGCAAAAAGGACTAATGAGTCTTTTTCTGAGCATTTCAGCAAGGAAGGACTTACTGCCTTGGTGGAGtataatgaaaagaaaatatttgaggtGACGCTGAAGGAAATGAAGTCTGCTTTAACAACACAGATAACAGAGGAGGCTGATATATCTGAAGTTATTGAGACTGTGAAGCTTCGGGTTAGAGATGCTAAGTTGCCAGAAACTGAGATTGTGCGGATCTTATGGGATGTTTTAATGGATGCTGTTCAGTGGTCTGGTAAAAATCAGCAACAGAATGCAAATGCTGCCCTGCGCAAGGTAAAAACTTGGGCAGAACTACTGAATACTTTCTGCACCAGTGGAAAACTTGAGCTGGAACTGATGTACAAAGTACAGATGCAATGCTACGAGGATGCTAAACTGATGAAACTGTTCCCTGAGATTATTAGATCTCTCTATGACCAAGATGTGCTGGCTGAAGATACCATTCTTCATTGGTTCCGTAAAGGAACAAACCCCAAAGGAAGGCAAACCTTTGTGAAGGCACTGGAACCCTTTGTTAATTGGCTGGAAGAGGCTGAAGAAGAGGAGTGA 1236 0.4175 MSSKEKPTLGGTRIKTRKRNIAAPLDPAAFADAVVQIYLDNAGDLELIAKSIESSDLNFSRYGDTFFEVIFTGGRTQPGTTKPDEGERHPYSIIEYEAKREVILPSVIYIQKVLRRRPFLIKNLENVMRRFLQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVAKGLVLTFITDFFKVYLNDNSLDDLISILKRGKIEDNLLVFFPPAKRTNESFSEHFSKEGLTALVEYNEKKIFEVTLKEMKSALTTQITEEADISEVIETVKLRVRDAKLPETEIVRILWDVLMDAVQWSGKNQQQNANAALRKVKTWAELLNTFCTSGKLELELMYKVQMQCYEDAKLMKLFPEIIRSLYDQDVLAEDTILHWFRKGTNPKGRQTFVKALEPFVNWLEEAEEEE 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02017 411 CDD W2_eIF5C_like 217 404 IPR043510 -
Tsu04g02017 411 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 1 411 - -
Tsu04g02017 411 SUPERFAMILY ARM repeat 253 408 IPR016024 -
Tsu04g02017 411 ProSiteProfiles W2 domain profile. 246 411 IPR003307 GO:0005515
Tsu04g02017 411 Gene3D - 253 407 - -
Tsu04g02017 411 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 411 - -
Tsu04g02017 411 Pfam eIF4-gamma/eIF5/eIF2-epsilon 338 411 IPR003307 GO:0005515
Tsu04g02017 411 SMART 542_3 325 410 IPR003307 GO:0005515
Tsu04g02017 411 Coils Coil 121 141 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02017 300 407 Eukaryotic Initiation Factors Gene Family AT2G34970 32.727 1.60e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02017 - - rcu:8274281 750.355