Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02014 ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCACACCCCACTTCGCCCTCTTCATCATCTTTTAGAAAGAAtagaaagaataataataatagtaaaaagaaACTTGGAAGAACTTCTTCATTTGAGTATTGGGGGAATGAGCCTCTTCATAAGATTCCTGATAGGTTGTTCCTTAATGGTTCTTCTGATTTTGCTTCTTTGTTCACTCAACAAGGCAAAAAGGGTACCAACCAAGATGCCATGGTTGTTTGGGAGAACTTTTGTTCTAGAGAAGATACAATATTCTGTGGAGTTTTCGATGGCCACGGTCCATATGGTCATATGGTTGCAAAAAGAGTGAGAGATTCACTTCCTCTAAAACTGAATACTCATTGGGAACTTAATGTATCTGGTGGTGAAGTGCTCAAGGAGATTACCGTTAATGCTGCAGGAAGCATGAACCCAGAAGAAGTCGCATTTATAGCTGCTGACGAGGAATCCAGGGTATCCGTTGATGCTGAGGAAACGGAAAAATCCCCAGAAATCTTTCAAACGCTTAAAGAATCCTTTTTAAAAGCATTCAAACTTATGGATAGAGAATTGAAGACGCACCAAACTATTGATTGCTTCTGTAGTGGAACAACAGCAGTAACTCTGGTTAAGCAGGGTCGTCATCTTGTTCTTGGAAATATTGGTGATTCTAGAGCTGTGCTGGGTACAAGAGAAAAAGATAATTCTCTTACTGCAGTGCAGTTAACTGTTGATTTAAAACCTAATCTTCCAGCCGAAGCAGAAAGAATTCGCAAATGTAAAGGGCGTGTTTTTGCTCTTCATGATGAACCTGAAGTTTGCCGAGTCTGGTTGCCAAACAATGATTCACCTGGCCTAGCCATGGCAAGGGCATTTGGAGATTTTTGTCTGAAAGATTTTGGTCTAATATCTGTTCCAGAGGTATCATACAGAAGTCTAACTGAGAAGGATGAGTTTGTTGTCATGGCAACAGATGGGATTTGGGATGTGCTATCAAATAAGGAAGTGGTAGACATTATAGCAGCCGCACCTCGGCGTTCAACAGCGGCTAGATCACTGGTTGAGACAGCAGTGAGAGCATGGAGATACAAATATCCAACTTCAAAAGTCGATGACTGTGCCGTGGTTTGTCTCTTTCTAGACTCAGGTGTTCAAAAATTATCAACCGCTTCTCATACCAACAAGTCCAAAGAACATCCTCCTAGTTCAGGAATTCAAGTCAGCAGTAATGGTGATAATGAAGGTGTTTCTGAACCTAATGCTCTAGCAAAATCAGGAACGTGCAAAGAAGGCAATGATAATAACATCGATGAAGAATTTAAGGAAGAGGAAGAGATAGATGCTGAGACAGAAAAAGAGTGGTCTGCTCTTGAAGGTGTATCGCGTGTCAACACATTATTAAACCTTCCAAGATTTACTCCGGATAAAGACGACAAAGCAGCTGCAGAAGCAGGGGTCAGAAAACGCAAATGA 1485 0.4121 MGSCFSAESRSPHPTSPSSSSFRKNRKNNNNSKKKLGRTSSFEYWGNEPLHKIPDRLFLNGSSDFASLFTQQGKKGTNQDAMVVWENFCSREDTIFCGVFDGHGPYGHMVAKRVRDSLPLKLNTHWELNVSGGEVLKEITVNAAGSMNPEEVAFIAADEESRVSVDAEETEKSPEIFQTLKESFLKAFKLMDRELKTHQTIDCFCSGTTAVTLVKQGRHLVLGNIGDSRAVLGTREKDNSLTAVQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVCRVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEVSYRSLTEKDEFVVMATDGIWDVLSNKEVVDIIAAAPRRSTAARSLVETAVRAWRYKYPTSKVDDCAVVCLFLDSGVQKLSTASHTNKSKEHPPSSGIQVSSNGDNEGVSEPNALAKSGTCKEGNDNNIDEEFKEEEEIDAETEKEWSALEGVSRVNTLLNLPRFTPDKDDKAAAEAGVRKRK 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02014 494 MobiDBLite consensus disorder prediction 394 420 - -
Tsu04g02014 494 ProSiteProfiles PPM-type phosphatase domain profile. 65 384 IPR001932 -
Tsu04g02014 494 MobiDBLite consensus disorder prediction 1 37 - -
Tsu04g02014 494 SMART PP2C_4 52 382 IPR001932 -
Tsu04g02014 494 Gene3D - 63 386 IPR036457 -
Tsu04g02014 494 SUPERFAMILY PP2C-like 65 385 IPR036457 -
Tsu04g02014 494 MobiDBLite consensus disorder prediction 476 494 - -
Tsu04g02014 494 PANTHER ALPHABET, ISOFORM E-RELATED 1 472 - -
Tsu04g02014 494 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 472 - -
Tsu04g02014 494 Pfam Protein phosphatase 2C 176 363 IPR001932 -
Tsu04g02014 494 MobiDBLite consensus disorder prediction 441 455 - -
Tsu04g02014 494 MobiDBLite consensus disorder prediction 1 26 - -
Tsu04g02014 494 MobiDBLite consensus disorder prediction 474 494 - -
Tsu04g02014 494 MobiDBLite consensus disorder prediction 394 456 - -
Tsu04g02014 494 CDD PP2Cc 65 384 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02014 Tsu-Chr4 21919676 21923609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02014 1 480 PP2C-type Phosphatase Gene Family AT3G02750 60.640 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02014 - - cam:101510446 799.275