Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02008 atgtGTGGGATATTCGCGTATCTGAATTACAACGTGGATAGAGAGAGAAGATACATCTTACAAGTTCTCTTCAACGGTTTAAGACGGTTAGAGTATCGCGGTTACGATTCCGCCGGAATCGCCATTGATGCTTCCGATTTCACTTCCTCTCCTCCTCTCGTCTTCCGTCAAGAAGGAAACATCGAATCTCTCGTCAAATCCGTCTACCAAGATGTTGgtgaaattgaattgaactTGGAAGAAAGTTTCAGAACTCACGCTGGAATTGCGCATACGCGTTGGGCTACACATGGTGAGCCTGCTCCGCGTAATAGTCATCCTCAAACTTCAGGTCCTGATAATGAATTCATGGTTGTTCACAATGGTGTTATCACTAATTATGAGGTTTTGAAGGCGACACTGATCCGACATGGCTTCACCTTTACATCGGAAACGGATACTGAAGTCATTCCCAAGCTTGCCAAGTTTGTTTATGACAATGCAAATGAAGGTGATCAGGTTGTTACCTTCAGTCAAGTTGTTCTGGAAGTTATGAGGCATCTTGAAGGAGCCTATGCACTTATTTTCAAAAGTCTACATTATCCTAATGAATTGATTGCTTGCAAGCGCGGCAGCCCTCTGCTCTTAGGTGTTAAAGAATTGGCAGAAAATAAAGAGAATGGCTCAGCATTTGAGGAAAACAAATTCCTATCAAAAGATGGAAAGCCCAGAGAACTGTTTTTGTCCAGTGATGCCAATGCTGTGGTTGAGCATACGAAGAAAGTGCTAGTTATTGAGGATGGCGAAGTTGTGCATCTCAAGGATGGTGGAGTTTCTATTTTAAAGTACGAGAATGACATGGGAGAACTTGGCGCGTCTCTCTCTAGAGCTTCTTCGGTTCGACGTGCATTATCTGTTCTGGAAATGGAGGTtgagcaaataaataaaggacaTTATGAGCATTATATGCAGAAGGAAATTCATGAGCAACCTGAATCTCTAACAACCACAATGAGGGGGAGGCTTATACGCCGGGGATCTAGTAAATCCAAGTCTGTTCTGTTGGGTGGACTGAAGGATCACCTCAAAACCATCAGGCGAAGTAGAAGAATAGTTTTCATAGGTTGTGGCACAAGTTATAATGCTGCTTTGGCAGCTAGACCCATCTTGGAAGAACTTTCTGGAATTCCTGTTACTATGGAAATTGCTAGTGATTTATTGGATCGGGAGGGACCAATATACCGAGAAGATACAGCCGTTTTTGTCAGTCAATCTGGTGAAACTGCAGATACTTTACTTGCATTGCAATATGCTTTAGACAATGGTGCATTATGTGTTGGGATAACAAACACTGTTGGCAGTGCAATAGCAAGGAATACACATTGTGGTGTTCATATAAATGCTGGTGCTGAGATTGGTGTGGCAAGTACCAAGGCATACACAAGCCAAATAGTAGTGATGGCCATGTTGGCTCTTGCAATAGGAGGTGATACTATTTCCAATCAAGCGAGAAGAGAAGCTATTGTAGATGGTCTTCATGAACTGCCAAACAAAGTCAGAGAGGTGCTGGAACTTGATCAAGAGATGAAGGATTTAGCAAATCTATTGATTGCTGAGCAATCTCTTCTTGTCTTTGGGAGAGGATACAACTATGCAACTGCTCTGGAGGGAGCTTTGAAAGTAAAGGAAGTGGCACTTATGCATAGTGAAGGGATACTTGCAGGTGAAATGAAGCACGGTCCTTTGGCATTAGTGGATGAAAATCTTCCAATTGTTGTTATAGCTACACGTGATGTTTGCTTCAGCAAACAGCAGTCTGTTATTCAGCAACTTCATGCCCGCAGAGGTCGTCTGATAGTTATGTGTTCAGAAGGGGATGCTGCTTCTGTATGCCCTGGTGAATCTTGTAGGGTGATTGAAGTTCCACAGGTCGAGGACTGTCTTCAACCTGTAATTAATGTAGTTCCATTACAGTTACTGGCATATCATCTCACTGTACTGAGGGGATTTAATGTCGACCAGCCTCGTAATCTTGCGAAGAGTGTTACCACGCAGTAA 2037 0.4227 MCGIFAYLNYNVDRERRYILQVLFNGLRRLEYRGYDSAGIAIDASDFTSSPPLVFRQEGNIESLVKSVYQDVGEIELNLEESFRTHAGIAHTRWATHGEPAPRNSHPQTSGPDNEFMVVHNGVITNYEVLKATLIRHGFTFTSETDTEVIPKLAKFVYDNANEGDQVVTFSQVVLEVMRHLEGAYALIFKSLHYPNELIACKRGSPLLLGVKELAENKENGSAFEENKFLSKDGKPRELFLSSDANAVVEHTKKVLVIEDGEVVHLKDGGVSILKYENDMGELGASLSRASSVRRALSVLEMEVEQINKGHYEHYMQKEIHEQPESLTTTMRGRLIRRGSSKSKSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSGIPVTMEIASDLLDREGPIYREDTAVFVSQSGETADTLLALQYALDNGALCVGITNTVGSAIARNTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISNQARREAIVDGLHELPNKVREVLELDQEMKDLANLLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPIVVIATRDVCFSKQQSVIQQLHARRGRLIVMCSEGDAASVCPGESCRVIEVPQVEDCLQPVINVVPLQLLAYHLTVLRGFNVDQPRNLAKSVTTQ 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02008 678 Pfam SIS domain 529 660 IPR001347 GO:0097367|GO:1901135
Tsu04g02008 678 Pfam SIS domain 358 485 IPR001347 GO:0097367|GO:1901135
Tsu04g02008 678 CDD SIS_GlmS_GlmD_2 520 676 IPR035490 -
Tsu04g02008 678 Gene3D - 310 677 - -
Tsu04g02008 678 ProSiteProfiles SIS domain profile. 354 493 IPR001347 GO:0097367|GO:1901135
Tsu04g02008 678 CDD GFAT 2 266 - -
Tsu04g02008 678 Pfam Glutamine amidotransferase domain 83 190 - -
Tsu04g02008 678 PANTHER GLUTAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE [ISOMERIZING] 2-LIKE 1 678 - -
Tsu04g02008 678 CDD SIS_GlmS_GlmD_1 363 488 IPR035466 -
Tsu04g02008 678 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 1 678 - -
Tsu04g02008 678 Gene3D - 514 663 - -
Tsu04g02008 678 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 2 276 IPR029055 -
Tsu04g02008 678 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 284 IPR029055 -
Tsu04g02008 678 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 269 IPR017932 -
Tsu04g02008 678 SUPERFAMILY SIS domain 309 677 IPR046348 GO:0097367|GO:1901135
Tsu04g02008 678 ProSiteProfiles SIS domain profile. 525 668 IPR001347 GO:0097367|GO:1901135
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02008 21 210 PRT Gene Family AT2G16570 26.289 3.58e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02008 K00820 - gmx:100779312 1214.13