Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01961 ATGCCAAAACTTAAGAGAAAAACTGGAATTCGAAGAACATGCATTTACGGGAATCTCATCTTCACTGTCTTCTCGGTATCTTTGATTTCTCAGGGTTTCACATTCACTAATCCACTTGacgAGAGACTAAATCTTAGAGCAGCCCCTAAAAACTTCCATCAGCTGAAGTTATCCCAGAAAGCTTTTGATGCTGTTCGAATTTGTAAAGAGGACCAACACCTGATCTTTAAGATGCTTGCTGCGATATTATGGCTGGGAAATATATCATCCAAAGTTATTGACAGTGGAAATCACATTGAAGTTATGAGTCATGAAGGAAATTGA 324 0.3765 MPKLKRKTGIRRTCIYGNLIFTVFSVSLISQGFTFTNPLDERLNLRAAPKNFHQLKLSQKAFDAVRICKEDQHLIFKMLAAILWLGNISSKVIDSGNHIEVMSHEGN 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01961 107 ProSiteProfiles Myosin motor domain profile. 1 107 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tsu04g01961 107 PANTHER MYOSIN 50 103 - -
Tsu04g01961 107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 104 IPR027417 -
Tsu04g01961 107 PANTHER MYOSIN-2 ISOFORM X1 50 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01961 Tsu-Chr4 21132111 21140149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01961 50 106 Myosins gene family AT5G54280 49.123 4.70e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01961 K10357 - gmx:100802074 75.0997