Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01932 ATGTTCTTCATCCATTCTCTTCATCATCCCCAAACTATTTCTTCATATTCACACCCCCAATCACCAAACATTATCACTCCAAACCATTATCCTAACAGAAACGGTTACATCAAGTTCCGAACAAACTACCGTGAAAATCTTCGTTACCTAAAAACGTTAACCATAATCAACCCCAACACTAAACCCAACAAACTCCCTCTCCCTGACGCCGTCAACCACATCCTCACCACCGTCACATTCCTCAAATCTCATTCCTTCTCCGACGCCGACATCCCCCGTCTCGTCCACTACTCTCCGCATCTCTTCACCACCGCCGTCTCCTCCTCCGACATCTCCCCTGTCTTCACTTTCCTCACCACCGACCTCCTCGCCACCGTTGAAGACTCCCGCGGCCTCATCCTCCGTTGTCCTAACCTCCTCTTCTCCGACCCTAACCACTTCCTAAAACCGACTCTCCAATTCCTCAAGGAAATCGGAATTAACAACCTTAACAAACCAACTAACCGGAATGCACATTTGTTGAACACGCGCGTGGAGAAGCTGCGGTTGAGGGTGAGGTTTATGGAGGAAGTGGTGGGGTTTACGGAGGAGGAAGCGAAGAAATCGTGTGCGAGATTGCCGGCGATATTGGGATATGATGTGGAGAATAACTTGTGGCCGAAGTTTGTGTATTTGGTGAAAGAAATGGAGAGGGATttggaagagttgaagaaatttcCTCAGTATTTTGGGTTTAGTTTGGAGAAGAGAATTGTTCCAAGACATTTGCATTTGAAGGAAAGAGGTGTTAAGATTCCTTTGAATAGAATGTTGATGTGGGGCGATGATAAATTCTATGCAAAGTGGAAGTGA 852 0.4554 MFFIHSLHHPQTISSYSHPQSPNIITPNHYPNRNGYIKFRTNYRENLRYLKTLTIINPNTKPNKLPLPDAVNHILTTVTFLKSHSFSDADIPRLVHYSPHLFTTAVSSSDISPVFTFLTTDLLATVEDSRGLILRCPNLLFSDPNHFLKPTLQFLKEIGINNLNKPTNRNAHLLNTRVEKLRLRVRFMEEVVGFTEEEAKKSCARLPAILGYDVENNLWPKFVYLVKEMERDLEELKKFPQYFGFSLEKRIVPRHLHLKERGVKIPLNRMLMWGDDKFYAKWK 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01932 283 Pfam mTERF 126 278 IPR003690 GO:0003690|GO:0006355
Tsu04g01932 283 PANTHER CGI-12 PROTEIN-RELATED 25 283 IPR003690 GO:0003690|GO:0006355
Tsu04g01932 283 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 25 283 - -
Tsu04g01932 283 Gene3D Transcription termination factor 3, mitochondrial 42 283 IPR038538 -
Tsu04g01932 283 SMART mt_12 233 264 IPR003690 GO:0003690|GO:0006355
Tsu04g01932 283 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Tsu04g01932 283 SMART mt_12 164 195 IPR003690 GO:0003690|GO:0006355
Tsu04g01932 283 SMART mt_12 200 232 IPR003690 GO:0003690|GO:0006355
Tsu04g01932 283 SMART mt_12 92 125 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01932 Tsu-Chr4 20855704 20857211 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu04g01932 mTERF 8.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01932 K15032 - gmx:100812333 385.571