Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01925 ATGGGTCGCTCCATATTTTGTCTTCATCaccttcttttttcttctcttcttattttcactttgttGCTCAATCATGTTCATGCCAACAAAAAGGTAAAGCTAGTTTCACTTTCATACTTGGGAGCACATTCACATGGTCCAACTCCTTCCACTGTTGACCTTGAAATTGCTACATCTTCACATTATGATTTATTGGGTTCAATCTTGGGAAGTGAAGAGAAGGCAAAAGATGCTATTATTTATTCATATAATAAACATATCAATGGGTTTGCAGCTATACTTGAAGAGGAAGAAGCTGAACAAATTGCAAAAAACCCAAAAGTATTATCTGTGTTCTTGAGCAAAGAACATAAACTGCACACTACACGTTCATGGGAATTTCTTGGATTGCGTGGAAATGATATGAATTCAGCTTGGCAAAAGGGAAGATTTGGTGAAAATACAATCATAGCTAACATTGATTCAGGTGTTTGGCCCGAATCTATGAGTTTTAACGACAGAGGAATAGGCCCAATTCCAGCAAAGTGGCGTGGGGGTAACATTTGTCAAATTAACAAACTCAATGGTTCTAGCAAAGTTCCATGTAACAGGAAGCTAATTGGAGCAAGATTTTTCAACAAAGCATTTGAATCATTCAATGGAAAACTTCCTCGCTCACAACAAACAGCACGTGACTTTGTAGGCCACGGTACTCACACACTATCAACAGCaggtggaaacttcgtaccagGTGCAAGTATATTTGGTATTGGCAATGGTACTGTAAAAGGTGGTTCACCGAGAGCTAGAGTTGCAACCTACAAAGTGTGTTGGTCACTAACAGATGCCGAGAGTTGCTTTGGTGCTGATGTATTAGCTGCCATTGATCAAGCAATTAGTGATGGTGTTGATTTAATTTCAGTTTCTGCCGGAGGCGAAACTAGCACAAGTTCTGAAGCAATTTTCACTGATGAGGTTTCAATAGGTGCATTTCATGCACTTGCTAGAAATATATTATTAGTCGCTTCAGCTGGAAATGACGGACCTACCCCTGGAAGTGTTGTTAATGTTGCTCCTTGGGTGTTTACGGTTGCTGCTAGTACATTAGATAGAGACTTCAGCAGTAATATTACCATTGGTAACAAAACAATCACGTCCTTTACCGTAGTGAATGCTGTCGATGCTAAGTTTGCCAATGTGTCAAGTCGAGATGCACAATTTTGTAGACCAGGAACACTTAATCCTTCAAAAGTGAAGGGTAAAATAGTGGCGTGTGTTCGAGAAGGGAAAGTAAAATCAGTTTCTGAGGGTCAAGAAGCTTTATCTGCAGGTGCAAAGggagtgattttgaaaaatcaacCTAAAGTTAGTGGAAGAACACTTCTTTCTGAGCCTCATGTTTTATCTACTATCAGTTGGCACGAGGATCATCCCAAAACAAGACAACATAGTATCGACTTAATTCCCACggACATAAAGTCAGGTACTAAAATAAGAATGTCACAAGCAGAAACTTTCTATGGAAGAAAACCAGCTCCAGTTATGGCTTCATACTCATCAAGAGGACCAAATAAAGTTCAACCATCAATACTTAAGCCTGATGTAACTGCGCCAGGTGTGAACATACTTGCTGCCTATTCATTGTTTGCAAGTGCATCTAATTTAATTACAGACACTCGTCGAGGTTTTCCATTCAATGTCATGCAAGGAACTTCAATGGCTTGTCCTCATGTTGCTGGCACTGCCGGACTTATCAAAACACTACATCCTAATTGGAGTCCAGCAGCTATTAAATCAGCTATCATGACCACTGCAACCACAAGAGATAACACAAACAAGCCAATTACCGATACATTTGAAAATACATTAGCAAATCCATTTGCATATGGTTCGGGACATATTCGACCCAACAGTGCAATAGATCCAGGACTTGTTTATGATCTAACCATTATTGATTACTTGAACTTCTTATGTGCTTCTGGATACAATCAACAACTAATTTCATCACTTAATTTCAACATGACATTTAAATGTTCAGGGTCACATAGCATAAATGACTTGAATTACCCTTCAATCACATTaccaaatcttggattaaatgTTGTTAATGTGACTAGGACAGTTACCAATGTTGGGCCACCAAGTACATATTTTGTAAAAGCCCAATTGCCTggatataaaataattgttgtACCAAATTCATTGAATTTCAAGAAAATTGGTGAAAAGAAGAGATTTCAAGTTGTAGTGCAAGCAACAAGTGTGACTCGAAGAAGGAAATACCAATTTGGTGAATTGATATGGACAAATGGAAAACACATTGTTAGGAGTCCCATTACTGTTCGACGCAAATGA 2334 0.3693 MGRSIFCLHHLLFSSLLIFTLLLNHVHANKKVKLVSLSYLGAHSHGPTPSTVDLEIATSSHYDLLGSILGSEEKAKDAIIYSYNKHINGFAAILEEEEAEQIAKNPKVLSVFLSKEHKLHTTRSWEFLGLRGNDMNSAWQKGRFGENTIIANIDSGVWPESMSFNDRGIGPIPAKWRGGNICQINKLNGSSKVPCNRKLIGARFFNKAFESFNGKLPRSQQTARDFVGHGTHTLSTAGGNFVPGASIFGIGNGTVKGGSPRARVATYKVCWSLTDAESCFGADVLAAIDQAISDGVDLISVSAGGETSTSSEAIFTDEVSIGAFHALARNILLVASAGNDGPTPGSVVNVAPWVFTVAASTLDRDFSSNITIGNKTITSFTVVNAVDAKFANVSSRDAQFCRPGTLNPSKVKGKIVACVREGKVKSVSEGQEALSAGAKGVILKNQPKVSGRTLLSEPHVLSTISWHEDHPKTRQHSIDLIPTDIKSGTKIRMSQAETFYGRKPAPVMASYSSRGPNKVQPSILKPDVTAPGVNILAAYSLFASASNLITDTRRGFPFNVMQGTSMACPHVAGTAGLIKTLHPNWSPAAIKSAIMTTATTRDNTNKPITDTFENTLANPFAYGSGHIRPNSAIDPGLVYDLTIIDYLNFLCASGYNQQLISSLNFNMTFKCSGSHSINDLNYPSITLPNLGLNVVNVTRTVTNVGPPSTYFVKAQLPGYKIIVVPNSLNFKKIGEKKRFQVVVQATSVTRRRKYQFGELIWTNGKHIVRSPITVRRK 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01925 777 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 28 775 - -
Tsu04g01925 777 Pfam Fibronectin type-III domain 679 774 IPR041469 -
Tsu04g01925 777 Pfam Subtilase family 145 606 IPR000209 GO:0006508|GO:0008236
Tsu04g01925 777 CDD Peptidases_S8_3 117 599 IPR034197 -
Tsu04g01925 777 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 775 IPR045051 -
Tsu04g01925 777 Gene3D - 363 500 - -
Tsu04g01925 777 Gene3D Peptidase S8/S53 domain 148 646 IPR036852 GO:0004252|GO:0006508
Tsu04g01925 777 CDD PA_subtilisin_like 369 464 - -
Tsu04g01925 777 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 120 IPR037045 -
Tsu04g01925 777 ProSiteProfiles Serine proteases, subtilase domain profile. 124 633 - -
Tsu04g01925 777 SUPERFAMILY Subtilisin-like 119 637 IPR036852 GO:0004252|GO:0006508
Tsu04g01925 777 ProSitePatterns Serine proteases, subtilase family, serine active site. 563 573 IPR023828 -
Tsu04g01925 777 Gene3D - 650 776 - -
Tsu04g01925 777 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Tsu04g01925 777 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Tsu04g01925 777 PRINTS Subtilisin serine protease family (S8) signature 562 578 IPR015500 -
Tsu04g01925 777 Pfam Peptidase inhibitor I9 58 120 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01925 Tsu-Chr4 20745255 20760661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01925 19 775 Subtilisin-like Serine Gene Family AT2G04160 50.636 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01925 - - gmx:100803751 1213.36