Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01923 ATGGAAGTGAATGAGAAATGTGATGTATACAGCTTTGGAGTACTTGCTCTGGAAATCATAATGGGAAAACATCCTGGAGATCTCATTTCGTTATTTTTGTCATCATCTACAAGGCCAATGGCTAATGATATGTTGCTGATAGATGTTTTAGATGAACGACCTCAACAAGTTATGAAACCAATGGATGAGGAGGTGATGTTGATTACCAGGTTGGCATTTGCTTGCTTGAGTCAAAATCCGCGTTCTCGTCCAACCATGGATCAAGTATCCAAGATGCTAGCAGCAGGAAAATCACCTTTTAAGAACCAACTTTCCATGATTAGACTAGGACAACTTCAATAA 342 0.3918 MEVNEKCDVYSFGVLALEIIMGKHPGDLISLFLSSSTRPMANDMLLIDVLDERPQQVMKPMDEEVMLITRLAFACLSQNPRSRPTMDQVSKMLAAGKSPFKNQLSMIRLGQLQ 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01923 113 Pfam Protein tyrosine and serine/threonine kinase 3 93 IPR001245 GO:0004672|GO:0006468
Tsu04g01923 113 ProSiteProfiles Protein kinase domain profile. 1 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01923 113 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 112 - -
Tsu04g01923 113 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 112 - -
Tsu04g01923 113 SUPERFAMILY Protein kinase-like (PK-like) 3 94 IPR011009 -
Tsu04g01923 113 Gene3D Transferase(Phosphotransferase) domain 1 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01923 Tsu-Chr4 20720268 20720609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01923 1 104 Receptor kinase-like Gene Family AT3G28040 35.514 6.64e-15 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu04g01923 PK_Tyr_Ser-Thr 1.9e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01923 - - mtr:MTR_7g481630 186.808