Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01909 ATGGGTTGCTCCATATTTTGTCTTCACCACCTTCTTTTTTCATCTCTTCTTATCTTCACTTTGTTGCTCAATCATGTTCATGCTAGCAAAAAGTGTTACATTGTATACTTGGGAGCTCATTCACATGGTCCAACCCCTTCCACTGTTGACCTTGAAATTGCTACATCTTCACATTATGATTTACTGGGTTCAATCTTGGGAAGTGAAGAGAAAGCAAAAGAAGCAATAATTTACTCATATAATAAACAGATTAATGGCTTTGCAGCTATACTTGAAGAGGAAGAAGCTACACAAATTTCAAAAAATCCTAAGGTTGTATCTGTGTTCTTgagtaaaaaacataaactgCACACTACACGTTCATGGGAATTTCTTGGATTGCGTGGAAATGATATGAACTCAGCTTGGCAAAAGGGAAGATTTGGTGAAAATACCATCATAGCTAACATTGATACAGGTGTTTGGCCCGAGTCAAAGAGTTTTAGTGACAGAGGAATAGGCCCAATTCCAGCAAAATGGCGTGGGGGTAACATTTGTCAAATTAATAAACTCAAAGGTTCTGACAAAGTTCCATGTAACAGGAAACTAATTGGAGCAAGATTTTTCAACAAAGCATATGAGAAAGATAATGGCAAACTTCCTCGTTCACAACAAACAGCACGTGATTTTGTAGGTCACGGTACTCACACCCTATCAACAGCGGGTGGAAATTTCGTACCAGGTGCAAGCATATTTGGTATTGGTAATGGTACAATAAAAGGTGGTTCACCAAGATCAAGAATTGCAACCTACAAAGTGTGTTGGTCACTAACAGATCCTGATAGTTGCTATGGTGCTGATGTATTAGCAGCTATTGAGCAAGCCATTAATGATGGTGTTGATTTAATTTCAGTTTCTATTAGTGGCAGTATTAGTGCAAATTCTAaagaaatatttgaagatcCGGTTTCAATAGGTGCATTTCATGCACTTGCTagaaatatattattagttgCCTCAGCTGGAAATGACGGACCTACCCCTGGAAGTGTTGTTAATGTTGCTCCTTGGGTGTTTACGGTTGCTGCTAGTACATTAGATAGAGACTTCAGCAGTACCATCACCATTGGTAACCAAACAGTCAGGgGAGCAAGTCTTTTTGTAAATTTGCCACCTAATCAGTCTTTCACTGTAGTGACTTCTACCGATGGTAAATTTGCCAATGCAACAAATCGAGACGCTCGATTTTGTAGACCGAGGACACTTGATCCCGCAAAAGTGAAGGGTAAAATAGTGGCGTGTATTCGAGAAGGGAAAATAAAATCAGTTTCTGAGGGTCAAGAAGCTTTGTCTGCAGGCGCAAAGGGAATGATTTTGGAAAATCAAGCTAAAATTAGTGGGAGAACACTTCTTTCCGAGCCTCATGTTTTGTCTACCGTTGCCAGGATCgaacaaaaaagagaaacaacaaaGCATGCCAGCACAACTgccaaGTCGGGTACTAAAATAAGATTGTCCCAAGCAATAGTATTATACGGAAGAAAGCCAGCTCCAGTTATGGCTTCATACTCATCTAGAGGACCAAATAAAGTTCAACCATCAATACTTAAGCCTGATGTAACTGCGCCAGGTGTGAACATACTTGCTGCCTATTCGTTGGTTGCAAGTGCATCTAATTTAATTACAGACACTCGCCGAGGTTTCCCATACAATGTCATGCAAGGAACTTCAATGGCTTGTCCTCATGTTGCTGGCACTGCCGGACTTATCAAAACACTACATCCTAATTGGAGTCCAGCAGCTATTAAATCAGCTATCATGACAACCGCAACCACAAGAGATAACACCAAGAAGCCAATAAGCGATGCATTTGATAAAACAGTAGCAAATCCATTTGCATATGGTTCAGGACACATTCAACCCAACAGTGCAATAGATCCAGGACTTGTTTATGATCTAACCATTATTGATTACTTAAACTTCTTATGTGCTTCTGGTTACAATCAACAACTAATTTCATCACTTAATTTCAACATGACATTTAAATGTTCAGGGTCACATAGCATAAATGACTTGAATTACCCTTCAATCACATTaccaaatcttggattaaatgTTGTTAATGTGACTAGGACAGTTACCAATGTTGGGCCACCAAGTACATATTTTGTAAAAGCCCAATTGCCTggatataaaataattgttgtACCAAATTCATTGAATTTCAAGAAAATTGGTGAAAAGAAGAGATTTGAAGTTGTAGTTCAAGCAACAAGTGTGACTCGAAGAAGGAAATACCAATTTGGTGAATTGATATGGACAAATGGAAAACACATTGTTAGGAGTCCCATTACTGTTCGACGCAAATGA 2349 0.3742 MGCSIFCLHHLLFSSLLIFTLLLNHVHASKKCYIVYLGAHSHGPTPSTVDLEIATSSHYDLLGSILGSEEKAKEAIIYSYNKQINGFAAILEEEEATQISKNPKVVSVFLSKKHKLHTTRSWEFLGLRGNDMNSAWQKGRFGENTIIANIDTGVWPESKSFSDRGIGPIPAKWRGGNICQINKLKGSDKVPCNRKLIGARFFNKAYEKDNGKLPRSQQTARDFVGHGTHTLSTAGGNFVPGASIFGIGNGTIKGGSPRSRIATYKVCWSLTDPDSCYGADVLAAIEQAINDGVDLISVSISGSISANSKEIFEDPVSIGAFHALARNILLVASAGNDGPTPGSVVNVAPWVFTVAASTLDRDFSSTITIGNQTVRGASLFVNLPPNQSFTVVTSTDGKFANATNRDARFCRPRTLDPAKVKGKIVACIREGKIKSVSEGQEALSAGAKGMILENQAKISGRTLLSEPHVLSTVARIEQKRETTKHASTTAKSGTKIRLSQAIVLYGRKPAPVMASYSSRGPNKVQPSILKPDVTAPGVNILAAYSLVASASNLITDTRRGFPYNVMQGTSMACPHVAGTAGLIKTLHPNWSPAAIKSAIMTTATTRDNTKKPISDAFDKTVANPFAYGSGHIQPNSAIDPGLVYDLTIIDYLNFLCASGYNQQLISSLNFNMTFKCSGSHSINDLNYPSITLPNLGLNVVNVTRTVTNVGPPSTYFVKAQLPGYKIIVVPNSLNFKKIGEKKRFEVVVQATSVTRRRKYQFGELIWTNGKHIVRSPITVRRK 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01909 782 Gene3D - 655 781 - -
Tsu04g01909 782 Pfam Subtilase family 142 608 IPR000209 GO:0006508|GO:0008236
Tsu04g01909 782 Gene3D - 360 505 - -
Tsu04g01909 782 Pfam Peptidase inhibitor I9 33 117 IPR010259 -
Tsu04g01909 782 ProSitePatterns Serine proteases, subtilase family, serine active site. 568 578 IPR023828 -
Tsu04g01909 782 CDD Peptidases_S8_3 114 604 IPR034197 -
Tsu04g01909 782 SUPERFAMILY Subtilisin-like 116 642 IPR036852 GO:0004252|GO:0006508
Tsu04g01909 782 ProSiteProfiles Serine proteases, subtilase domain profile. 121 638 - -
Tsu04g01909 782 Pfam Fibronectin type-III domain 684 779 IPR041469 -
Tsu04g01909 782 Gene3D Peptidase S8/S53 domain 145 651 IPR036852 GO:0004252|GO:0006508
Tsu04g01909 782 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 117 IPR037045 -
Tsu04g01909 782 PRINTS Subtilisin serine protease family (S8) signature 567 583 IPR015500 -
Tsu04g01909 782 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Tsu04g01909 782 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Tsu04g01909 782 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 20 780 - -
Tsu04g01909 782 CDD PA_subtilisin_like 366 474 - -
Tsu04g01909 782 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 780 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01909 Tsu-Chr4 20575740 20583884 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01909 25 780 Subtilisin-like Serine Gene Family AT2G04160 51.436 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01909 - - gmx:100803751 1220.3