Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01906 ATGGGTGGTTCCTTATTTTCTCTTCACATTATGGTTTCATTACTTTTCATTTTCGTGTTCTTGCTAGAAGCAGTCCATGGCACAAAAAAGTGTTACATTGTATATTTGGGAGCACATTCTCATGGTCCTCGCCCTACATCTGTTGAACTTGAAATTGCTACCAATTCTCATTATGATTTATTAAGTTCAACTTTGGGAAGtcGGGAGAAAGCAAAAGAAGCAATCATTTACTCATATAACAAACACATCAATGGCTTTGCTGCGTtacttgaagaagaagaagcagcagATATTTCAAAAAAGACAAATGTAGTGTCAGTGTTCTTGAGCAAATCTCATAAGCTGCACACTACAAGGTCATGGGAATTTCTTGGATTACAAAGAAATGGTAAGAACACTGCATGGCAAAAGGGGAACTTTGGTGAAAATACAATAATCGCAAACGTTGACTCGGGTGTTTGGCCGGAATCCAAGAGCTTCAGTGATAACGGATttggacctattccatcaaaaTGGCGTGGGAGAAATGCGTGTCAAATTAGACAATTCcgcaatttgaagaaaaatccTTGCAACAGGAAGCTAATCGGAGCTAGATACTTCAGCAATGCTTATGAAGCATATTATGGCAAGCTTCACTCATGGCTACTTAGTGCACGTGACTTTGTAGGCCACGGTACTCATACACTATCAACAGCaggtggaaacttcgtaccagGTGCAAGTATATTCGGTATTGGCAATGGTACCGTAAAAGGTGGTTCACCGAGAGCTAGAGTTGCAACCTACAAAGTGTGTTGGTCTCTAACAGATCTTGCTGACTGCTTCGGAGCTGATGTGCTAGCTGCTATTGACCAAGCCATTAGTGATGGTGTTGATATAATCTCACTTTCAATTGCTGGCCAATACGTTGTCTATCCCAAAGATATTTTTACAGATGAGGTTTCAATAGGTGCATTCCATGCACTTTCTAGAAACATATTAGTAGTTGCCTCTGCAGGGAACGATGGACCAACCGCAGAAAGCGTGGTGAATATAGCTCCATGGGTATTCACAATTGCTGCTAGTACATTAGACAGAGACTTCAGCAGTACCATAACTATCGGTAACAAAAGAATCATGGGAGCTAGTCTTTTTGTAAACTTACCACCAAATCAGGACTTTTCTCTGATTCTTGCTACAGATGGTAAACTTGCCAATGCGACAGATCGTGCTGCGCGACTTTGTAGACCTGGAACACTTGATCCTTTAAAAGTGAAGGGGAAAATAGTGGGATGTGATCGAGAAGGAAATATAAAATCAGTTGCTGAGGGTCAGGAAGCTTTAACAGCAGGTGCCAAGGGAATGCTTTTGAGCAATCGACCGCAACAAGGGAAAACAACTCTTGCTGAGCCTCATGTTCTGTCTTGTGTGGGTGGATCTAAAAAAGAATTCACTAAAATATCTTCTAATACAACAGAACTTGCAGAGTCACATGCTGCTTATGACATAACTTCCATGGACTCTAAATTAAAGTCGGGTACTAGAATAAGGTTTTCAGGAGCAAAAACACTCTATAGAAGAAAGCCAGCTCCAGTAATGGCTTCATTCTCATCTAGAGGACCAAATAAGATTCAGCCATCAATACTCAAGCCTGATGTAACTGCACCAGGTGTGAACATACTTGCTGCCTATTCATTGTACGCAAGTGCTTCCAACTTAATAACAGACAATCGCCGAGGTTTTCCATACAATGTACAACAAGGAACTTCTATGTCTTGCCCTCATGTGGCCGGCATTGCAGGACTTCTCAAAACAAAGCATCCTAATTGGAGTCCGGCAGCTATTAAATCAGCTATCATGACCACAGCAACCACACTAGATAACACAAACAGGCCAATTCAGGATGCATTTGAAAAAAAACTAGCAATTCCCTTTGATTATGGTTCAGGGCATGTTCAACCTGACCTTGCAATAGATCCTGGACTTGTTTATGATCTAGGCATTAAGGATTACTTGAATTTCCTATGTGCTTATGGATATGACCAACAACTCATTTCAGCACTTAATTTCAACGGTACATTTGTTTGTTCCGGATCTCACAGCATAGAAGACTTTAACTACCCTTCAATCACGTTACCCAATCTGGAGTTAAATGTCGTAAATGTCACTCGAACAGTCACCAATGTTGGGTCACCAAGCACATATGTAGCAAAAGTCCAATTGTCTGGATATAAAATTGCCGTTGTACCAAACTCCTTGACTTTCAAGAAAATTGGTGAAAAGAAGGCATTCCAAGTTATTGTGCAGGCAACAAATGTGACTCCACGGAAGAAATATCAATTTGGAAATTTGCAATGGACAGATGGAAAACACATTGTAAGGAGCCCTATCACAGTTAAGCGCAAGTAA 2391 0.3931 MGGSLFSLHIMVSLLFIFVFLLEAVHGTKKCYIVYLGAHSHGPRPTSVELEIATNSHYDLLSSTLGSREKAKEAIIYSYNKHINGFAALLEEEEAADISKKTNVVSVFLSKSHKLHTTRSWEFLGLQRNGKNTAWQKGNFGENTIIANVDSGVWPESKSFSDNGFGPIPSKWRGRNACQIRQFRNLKKNPCNRKLIGARYFSNAYEAYYGKLHSWLLSARDFVGHGTHTLSTAGGNFVPGASIFGIGNGTVKGGSPRARVATYKVCWSLTDLADCFGADVLAAIDQAISDGVDIISLSIAGQYVVYPKDIFTDEVSIGAFHALSRNILVVASAGNDGPTAESVVNIAPWVFTIAASTLDRDFSSTITIGNKRIMGASLFVNLPPNQDFSLILATDGKLANATDRAARLCRPGTLDPLKVKGKIVGCDREGNIKSVAEGQEALTAGAKGMLLSNRPQQGKTTLAEPHVLSCVGGSKKEFTKISSNTTELAESHAAYDITSMDSKLKSGTRIRFSGAKTLYRRKPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILAAYSLYASASNLITDNRRGFPYNVQQGTSMSCPHVAGIAGLLKTKHPNWSPAAIKSAIMTTATTLDNTNRPIQDAFEKKLAIPFDYGSGHVQPDLAIDPGLVYDLGIKDYLNFLCAYGYDQQLISALNFNGTFVCSGSHSIEDFNYPSITLPNLELNVVNVTRTVTNVGSPSTYVAKVQLSGYKIAVVPNSLTFKKIGEKKAFQVIVQATNVTPRKKYQFGNLQWTDGKHIVRSPITVKRK 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01906 796 ProSitePatterns Serine proteases, subtilase family, serine active site. 582 592 IPR023828 -
Tsu04g01906 796 CDD PA_subtilisin_like 365 471 - -
Tsu04g01906 796 Pfam Subtilase family 141 623 IPR000209 GO:0006508|GO:0008236
Tsu04g01906 796 PANTHER SUBTILISIN-LIKE PROTEASE GLYMA18G48580 20 795 - -
Tsu04g01906 796 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Tsu04g01906 796 PRINTS Subtilisin serine protease family (S8) signature 581 597 IPR015500 -
Tsu04g01906 796 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Tsu04g01906 796 Pfam Fibronectin type-III domain 698 793 IPR041469 -
Tsu04g01906 796 Gene3D Peptidase S8/S53 domain 144 665 IPR036852 GO:0004252|GO:0006508
Tsu04g01906 796 Gene3D - 359 519 - -
Tsu04g01906 796 Pfam Peptidase inhibitor I9 32 116 IPR010259 -
Tsu04g01906 796 Gene3D - 669 795 - -
Tsu04g01906 796 SUPERFAMILY Subtilisin-like 115 656 IPR036852 GO:0004252|GO:0006508
Tsu04g01906 796 CDD Peptidases_S8_3 113 618 IPR034197 -
Tsu04g01906 796 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 795 IPR045051 -
Tsu04g01906 796 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 116 IPR037045 -
Tsu04g01906 796 ProSiteProfiles Serine proteases, subtilase domain profile. 120 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01906 Tsu-Chr4 20520596 20527627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01906 32 794 Subtilisin-like Serine Gene Family AT2G04160 51.558 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01906 - - gmx:100813564 1169.45