Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01905 atgggTGGTTCCCTATTTTCTATTCACATTATGGTTTTAttacttttcattttcttgatcTTGCTAGAAGCCGTCCATGGTACCAGAAAGTGTTACATTGTATACTTGGGAGCACATTCTCATGGCCCTCGTCCTACATCTCTTGAACTTGAAATTGCTACCAATTCTCATTATGATTTACTAAGTTCAACCTTGGGAAGCCGGGAGAAAGCGAAAGAAGCAATAATTTATTCGTATAACAAACACATCAATGGCTTTGCTGCGTTACTTGAAGATGAACAAGCAGCATATATTGCAAAAAATGGAAATGTAGTGTCGGTGTTCTTGAGCAAACCTCATAAACTTCACACTACACGTTCATGGGAATTTCTTGGATTGCAAAGAAATGGTAAGAACACTGCATGGCAACAGGGAAAGTTTGGTGAAAATACAATAATTGCAAACATCGACTCGGTAGGTGTTTGGCCGGAATCCAAGAGCTTCAGTGATAACGGATttggacctattccatcaaaaTGGCGTGGGAGAAATGCGTGTCAAATTAGACAATTCGgcaaattgaagaaaaatccTTGCAACAGGAAGCTAATTGGAGCTAAATTCTTCAGCAATGCTTACGAGGCATATAATGGCAAGCTTCACCCATCGCTACTTACCGCACGTGACTTTGTAGGCCACGGTACTCATACTCTATCAACAGCTGGTGGAAACTTTGTTCCAGGTGCAAGTATATTTGGCATTGGCAACGGAACTGTAAAAGGTGGTTCACCAAGAGCTAGAGTTGCAACATACAAAGTGTGCTGGTCTCTAACCGATGTTGCTGACTGCTTTGGAGCTGATGTGTTAGCTGCCATTGACCAAGCCATTAGTGATGGTGTTGATATAATCTCACTTTCAGCTGCTGGCCAATATCTTGTCCATCCTGAAGATATTTTCACAGATGAGGTTTCCATAGGTGCATTTCATGCACTTTCTAGAAACATATTAGTAGTTGCCTCTGCGGGGAATGACGGACCAACCCTAGGAAGCGTTGTGAATATAGCTCCATGGGTATTCACGATTGCTGCTAGTACATTAGACAGAGACTTCAGCAGTACTATAACTTTTGGTAACAATCAACAAGTGACGGGAGCCAGTCTTTTTGTAAACTTGCCACCAAACCAGGCATTTTCTCTAATTCTTGCCACAGATGGTAAACTTGACAATGCAACAAATCGTGATGCACAACTTTGTAGGCCTGGAACACTTGATCCTTCAAAAGTTAAGGGGAAAATAGTGGGATGTGATCGAGAAGGAAATATAAAATCAGTTGGTGAGGGTCAGGAAGCTTTAACAGCAGGCGCAAAGGGAATGCTTTTGAGTAATCGACCACAACAAGGGAAAACAAGTCTTGCTGAGCCTCATgttttgtcttgtgtgacaAGGCCACAAACCGAAAGCAAGTACCACCCTCCGGCTGCACCAGAACGTGCAGGGGACTCTAAATTAAAGTCGGGTACTACAATAAAGTTTTCAGGAGCAAAAACATTCTATGGAAGAAAGCCAGCTCCAGTAATGGCTTCATTCTCATCTAGAGGACCCAATAAGATTCAGCCATCAATACTCAAGCCTGATGTAACTGCACCAGGTGTAAACATACTAGCTGCCTATTCATTGTTCGCAAGTGCATCCAACTTAGTAACAGACAACCGCAAAGGTTTTCCATTCAATGTAATGCAAGGAACTTCGATGTCTTGCCCTCATGTGGCTGGCATTGCAGGACTTCTCAAAACAAAGTATCCTAATTGGAGTCCAGCAGCTATTAAATCAGCTATCATGACCACAGCAACCACACTAGATAACACAAACAGGCCAATTCAGGATGCATTTGAAAAAAAACTAGCAACTCCCTTTGCTTATGGTTCAGGGCATGTTCAACCTGACCTTGCAATAGATCCTGGACTTGTTTATGATCTAGGCATTAAGGATTACTTGAATTTCCTATGTGCTTATGGATACAACCAACAACTTATTTCAGCACTTAATTTCAACGGTACATTTGTTTGTTCCGGATCTCACAGCATAGAAGACTTTAACTACCCTTCAATCACCTTACCGAATCTCGAGTTAAATGCCGTTAATGTCACTCGGACAGTCACCAATGTTGGGTCACCAAGCACATATGTAGCAAAAGCCCAATTGCCTGGATATAAAATTGTTGTTGTACCAAACTCCTTGACTTTCAAGAAAATTGGTGAAAAGAAGACATTCCAAGTTATTGTGCAGGCAACAAATGTGACTCCACGGAAGAAATATCAATTTGGAAATTTGCAATGGACAGATGGAAAACACATTGTAAGGAGTCCTATCACAGTTAAGCGCAAGTAA 2367 0.403 MGGSLFSIHIMVLLLFIFLILLEAVHGTRKCYIVYLGAHSHGPRPTSLELEIATNSHYDLLSSTLGSREKAKEAIIYSYNKHINGFAALLEDEQAAYIAKNGNVVSVFLSKPHKLHTTRSWEFLGLQRNGKNTAWQQGKFGENTIIANIDSVGVWPESKSFSDNGFGPIPSKWRGRNACQIRQFGKLKKNPCNRKLIGAKFFSNAYEAYNGKLHPSLLTARDFVGHGTHTLSTAGGNFVPGASIFGIGNGTVKGGSPRARVATYKVCWSLTDVADCFGADVLAAIDQAISDGVDIISLSAAGQYLVHPEDIFTDEVSIGAFHALSRNILVVASAGNDGPTLGSVVNIAPWVFTIAASTLDRDFSSTITFGNNQQVTGASLFVNLPPNQAFSLILATDGKLDNATNRDAQLCRPGTLDPSKVKGKIVGCDREGNIKSVGEGQEALTAGAKGMLLSNRPQQGKTSLAEPHVLSCVTRPQTESKYHPPAAPERAGDSKLKSGTTIKFSGAKTFYGRKPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILAAYSLFASASNLVTDNRKGFPFNVMQGTSMSCPHVAGIAGLLKTKYPNWSPAAIKSAIMTTATTLDNTNRPIQDAFEKKLATPFAYGSGHVQPDLAIDPGLVYDLGIKDYLNFLCAYGYNQQLISALNFNGTFVCSGSHSIEDFNYPSITLPNLELNAVNVTRTVTNVGSPSTYVAKAQLPGYKIVVVPNSLTFKKIGEKKTFQVIVQATNVTPRKKYQFGNLQWTDGKHIVRSPITVKRK 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01905 788 SUPERFAMILY Subtilisin-like 115 648 IPR036852 GO:0004252|GO:0006508
Tsu04g01905 788 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 116 IPR037045 -
Tsu04g01905 788 Gene3D - 661 787 - -
Tsu04g01905 788 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 787 IPR045051 -
Tsu04g01905 788 PANTHER SUBTILISIN-LIKE PROTEASE GLYMA18G48580 20 787 - -
Tsu04g01905 788 Pfam Peptidase inhibitor I9 32 116 IPR010259 -
Tsu04g01905 788 ProSiteProfiles Serine proteases, subtilase domain profile. 120 644 - -
Tsu04g01905 788 MobiDBLite consensus disorder prediction 475 497 - -
Tsu04g01905 788 CDD Peptidases_S8_3 113 610 IPR034197 -
Tsu04g01905 788 Gene3D Peptidase S8/S53 domain 144 657 IPR036852 GO:0004252|GO:0006508
Tsu04g01905 788 CDD PA_subtilisin_like 366 473 - -
Tsu04g01905 788 Pfam Subtilase family 201 615 IPR000209 GO:0006508|GO:0008236
Tsu04g01905 788 PRINTS Subtilisin serine protease family (S8) signature 573 589 IPR015500 -
Tsu04g01905 788 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Tsu04g01905 788 Pfam Fibronectin type-III domain 690 785 IPR041469 -
Tsu04g01905 788 ProSitePatterns Serine proteases, subtilase family, serine active site. 574 584 IPR023828 -
Tsu04g01905 788 Gene3D - 360 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01905 Tsu-Chr4 20502952 20511049 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01905 32 786 Subtilisin-like Serine Gene Family AT2G04160 52.431 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01905 - - gmx:100813564 1197.96