Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01890 ATGGAGAGGGTTGCAGAGCCAAAGGTACTTCCTCGGACCTTGCCTGTTGTGTTTGAAGTATCTGATGCACACACAGCTGTAAAAAGAGAAGCTGGCGGTCAGAGATTAACGGGGAAGGATGTTTCATGTATGCGTGCGGTTTCAGCAAGAGATTTGAATCAGTTTGCAAAAGCACAGGATGGCCCTATGACGTGTCTGGCCTCCATTAAGGAAGTGGCGCAGTTGTCAAATGCAAGAATTGTTTTGGTAACGGAGGATATGGGATTTGATACACGGTCCTCGCAAGAACGTGGAAAAGCCTCTTTACGAGAACCTGATATTGAGACATTGAAGAGCAGCAGTgattcttttggggaaattgaTCCAAGTTCATTTGCTGGTGCTACTCACCCCCCAGAACCTATCGATACTGATCTCATGCGAACGGTTTATGTACCAATAGATCAAAACAAATCTGAGTCTGGATGCTTAATGAAGAACATGTCTTTGAAGGGTCCTTTCCTAGAAGATCTTTCGATTCGTAATATTACTAAGAAACCAAGCATAGCTGTTGTTTCTCCTTCAGAAAGCATGGTTGAAGAATCAAATGGGGACACAGGAAACTTAGTCTCACCGTTTTCAGGCGCTCGTGCATCACAGAATACTGAAAACTCTCTACCTCCCCTAGATTCTGAAGAGAAAGAATGCGTTTGGGATTCTTCTTTGCCTCCAAGTGAAAATGTCAGTCCACTTAGTAGTATTGACAGTAGTAGTGTTGTCAGAACAATGAGCATTGCTAATAGTTGTGCGAGTACATATCGCAGCGATGCATTCACTAGTGACGGCATGATTAGTATAGACAAGAATTGTGATAGTATTAAAGGAAGTGTAAGAGGGGATTCACTTGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGATAGCAGTGGTCTAAGTGATGACAGCAACTGGAGTAACATCACTGGCAGTGCCAATAAACCACACAAAGGAAATGATCCGAGGTGGAAGGCTATCCTTGCCGTCCGAGCACGGGATGGAATTTTGGGCATGAGTCATTTTAAGTTACTCAGACGACTTGGTTGTGGTGATATCGGAAGTGTGTATCTCTCTGAGCTGAGTGCAACTCGGTGTTATTTTGCAATGAAAGTTATGGACAAGGCATCCTTAGCTGCCAGAAAGAAGCTGATCAGAGCACAGACCGAAAGGGAGATATTGCAGTTGCTCGACCATCCATTTCTGCCTACGTTGTATACTCATTTTGAGACTGACAGATTTTCATGTTTGGTAATGGAATACTGTCCCGGTGGTGATCTACACACTTTAAGACAACGGCAACCAGGGAAACATTTCTCGGAATATGCTGCACGCTTTTATGCTGCAGAGGTCCTGTTGGCAATTGAATATCTTCACATGCTTGGAGTTGTTTATCGTGACCTTAAACCTGAAAACGTACTAGTTCGAGAAGATGGTCACATAATGCTCTCAGACTTCGATCTTTCTCTTAGATGTGTTGTTTCACCTACACTTATCAGAACTCATGACGGAGACCCATCAAAACGGGCAGGTGGTGGTGCATTCTGTGTCCAGCCTGCTTGTATCGAGCCTACATCTGTATGCATCCAGCCTGCCTGTTTTATGCCTAAGCTTTTCCctcaaagaaacaaaaaatcacgGAAGCCTAAAGCTGATCCCGGCCTGACAACTGCCGCACTTCCAGAACTTCTTGCTGAGCCTACAACTGCTCGGTCGATGTCCTTCGTTGGAACTCATGAGTATCTTGCCCCTGAAATTATCAAAGGAGAAGGTCACGGAAGTGCAGTTGATTGGTGGACATTTGGCATATTTTTGCATGAGTTGTTGTATGGTAAAACCCCTTTCAAAGGATCAGGAAATCGAGCTACACTGTTTAATGTAGTAGGGCAGCAGCTCAAGTTTCCGGAATCGCCAGCTACAAGTTATGCCAGCCGTGATCTGATCCGTGGTTTGCTGGTGAAGGAGCCACAGAACCGTCTTGGAGTGAAGAGGGGTGCAACTGAGCTGAAGCAACACCCTTTCTTTGAAGGCGTGAACTGGGCACTGATTAGGTGCAGCACGCCGCCGGAAATTCCAAGACCGATGGAAAATGAACAACCAGCAAAGTTTGAAGCAGTTAATAATACTGTTGGGGTTGGGAGCAAtagtaagaaaatggttagtaATAATGAGGTGAAGTCTGGTGGTGGTAAATATCTTGACTTTGAGTTCTTTTAG 2250 0.4378 MERVAEPKVLPRTLPVVFEVSDAHTAVKREAGGQRLTGKDVSCMRAVSARDLNQFAKAQDGPMTCLASIKEVAQLSNARIVLVTEDMGFDTRSSQERGKASLREPDIETLKSSSDSFGEIDPSSFAGATHPPEPIDTDLMRTVYVPIDQNKSESGCLMKNMSLKGPFLEDLSIRNITKKPSIAVVSPSESMVEESNGDTGNLVSPFSGARASQNTENSLPPLDSEEKECVWDSSLPPSENVSPLSSIDSSSVVRTMSIANSCASTYRSDAFTSDGMISIDKNCDSIKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAVRARDGILGMSHFKLLRRLGCGDIGSVYLSELSATRCYFAMKVMDKASLAARKKLIRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLAIEYLHMLGVVYRDLKPENVLVREDGHIMLSDFDLSLRCVVSPTLIRTHDGDPSKRAGGGAFCVQPACIEPTSVCIQPACFMPKLFPQRNKKSRKPKADPGLTTAALPELLAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQNRLGVKRGATELKQHPFFEGVNWALIRCSTPPEIPRPMENEQPAKFEAVNNTVGVGSNSKKMVSNNEVKSGGGKYLDFEFF 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01890 749 Gene3D Phosphorylase Kinase; domain 1 351 436 - -
Tsu04g01890 749 Gene3D Transferase(Phosphotransferase) domain 1 437 504 - -
Tsu04g01890 749 MobiDBLite consensus disorder prediction 110 136 - -
Tsu04g01890 749 MobiDBLite consensus disorder prediction 187 220 - -
Tsu04g01890 749 SMART serkin_6 353 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01890 749 MobiDBLite consensus disorder prediction 290 330 - -
Tsu04g01890 749 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 94 749 - -
Tsu04g01890 749 MobiDBLite consensus disorder prediction 294 326 - -
Tsu04g01890 749 MobiDBLite consensus disorder prediction 187 246 - -
Tsu04g01890 749 Pfam Protein kinase domain 583 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01890 749 Pfam Protein kinase domain 354 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01890 749 ProSiteProfiles Protein kinase domain profile. 353 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01890 749 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Tsu04g01890 749 SUPERFAMILY Protein kinase-like (PK-like) 335 708 IPR011009 -
Tsu04g01890 749 Gene3D Phosphorylase Kinase; domain 1 705 715 - -
Tsu04g01890 749 Gene3D Transferase(Phosphotransferase) domain 1 581 704 - -
Tsu04g01890 749 PANTHER FLIPPASE KINASE 1-RELATED 94 749 - -
Tsu04g01890 749 CDD STKc_phototropin_like 351 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01890 Tsu-Chr4 20294109 20300349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01890 1 749 AGC Kinase Gene Family AT2G44830 65.212 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tsu04g01890 Pkinase 2.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01890 - - gmx:100818352 1210.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00068 08 601426 604208 Tsu04g01890 04 20294109 20300349 PCT