Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01807 ATGGCAAAGAGGTCTCAAAGATTCCCTGTGCAGTATGAGAAAGATCAGTCAGGTTGTATGTGGGGATTTATTAGTATGTTTGATTTTCGTCATGCCCGCATTACTCGgaagttgattgctgataaGAGCCACAACAACAACCATGCTCTTGGTGCTGTACTTACCAAGAACAAATTTGAGGTGTTGAGCAATTTGGATGAAGATTATCAAGGCAATATGGACAGAGGAGAGAGTAAGAGACTAACGGCGACAACAGAGGCTGACAAGCTTAGTGTGAAGAAACTCATAGAAGAAGAAATGTTCATTGACCAGGATGAAATAAAGGATCAAGGTAATGTTGTTGAATCGACACGAACTTACTTAGGGTCTGAAGATTTGTTGAAGACAGattccaaaagaaaaagaaaatcacgCATGAAAAGCCGAGATATGGACAGCAATGATTTGAGTGCAACTTTGAAATCTGAAGTCACACGTAATCAGTATTCAAATCAACAATCCAGAGATAATATAGATTTGGACAAGATTATGGAAGACTTTTGTCAAATTGAACATGCTTGTTCCTTGATGCATGATGACGATGATAGCAAAGTTCTTGTTCAATCAAACCAAAAGAATATCAATTCTGAAGAACTTGAAAGCGATGCAATTCATGATTTTGTGAATCAGATGATATTGAATGGGAAAGATATGGTAGAAGATAAAAAATTCCTTTGTTCTCATGAACTCATGGAAACACTTCAGGTTATAAGCTCGGACAAGGAATTGTTTCTAAAACTTCTACAAGATCCAAATTCGCACTTACTGAGATATATTCAGGAGTTGGAAAATGCTCAAGGGAGAAGTGAAAAAGAATGCAATTCTGTTGCTGATTCCAACTTCTCCGAACAAGACCTTGGCAATCTAAAACAACCTAGAGATATTGTCAACCGCAAGTATCATAAGTTTTTCTGGAAAAAGGTAAAGTCTCAATCAAAAGTtccaacaaataaaaatgtgaaaacTGAGATTCCAAATAGAATTGTCATTCTGAAACCTGCACCAACAAGAATGCAAAATTCAGAAAGTGAAAACAACGTTGTTTCATCACTTGCTTCTCATGATATTGACCATTACAAAGGTCCTTCTGTGAGAGTTGGTTCACCCTTTTCTCTTACCGagataaaaaggaaattaagaCATGCTATAGGAAAGGAGAAGCATGGAAACCACAAACTCCCTGCTGAGCATCAAACCAATGACTCGAGAGGCAAAGGCATTTGTAAAGATAAAACTGGAATGAAATCTCCTAATAAGGATcattttttcattgaaaaaattgGAAGACCTATGTTTGATGTTGTGAAAGGAAACAATACTGGTATACATGAAACTGGTTCTACGAAGGAAAAAGTTTCGAACATATACATCGAGGCTAAGAAACATTTATCTGAGATGCTGGTAGATAATGGAGATGATAACACAAGCATTTCTAGCAGGCAGATTCCGAAAACCCTTGGGAGAATACTATCTCTTCCTGAGTACAACTTTTCTCCTCTTGGAAGTCCTGGAGGGAATTTGGAGCATAATTTTTTGACTACACATGCAAGATTATCCAGTTCAGATAAAACTTGGCAGGTTAATGAGGATAGCTTGTCTCCCAAGCAAGACACCTATATTGACCAACCCGATCAGGAAACAAACAATTCAAGGAACCAATCAAGTGTTTGTGACAAAAGGTCTAATGAAGTACCAGTAATTGAGTCAGACTCAACTTTCTTGCATGATCTTGATCACGTTGATACTGCTGAAGTCAGTTATCCTGTTAGAGACGAGATAGTCGCAGAAGGTATTGTAGAATTCGCAAAAGATATTGTTTTGGAATCTTCCTCAGATCCAAACTGCTGTACTGCAGGGAAGGACCAAAATCATGATGTCTCAAAAATTGCTGTTGATGCTAAATATTCTGAATGTTTGAATGGGGATTTAAAAGAGAACCAACAATCATCTCCACTATCATCTCCTTCTCACTCTTCCATCACTGAGAAAATTGAAGAGCTAGAAAGTTGTACAGATGTATCTGGTCGTCCAAGCCCAGTATCTGTGCTCGATATACCGTTCTCGGATGATGACCCTGGCTACTCCACATGTCACCCTGTTAAATTACGAGTACAATCGCTACAAATTCGATTTGAGGAACAAGACTGTTCATCGATGGATCGATTTCATAGAAGAAAATCTTGTCTAGAAGAAAATGAATTGATATATGACTACATATCTGCTGTCTTCCACACCGCTAGCTTGACACAAGATCAACTCTTGATAAAATGTCTTTCCTCAGACAAGATACTAGATCCTTCCTTGTTTGATCATGTAGAGTTCTTCTCAAACATGCTTTGCCACGAACAGAAGCTCCTATTCGACTGTATCAACGAGGTTCTGATGGAGGTTTGTTGGAATTACTTTGGGGTTTCACCTTGGGTATCATTTGTAAAACCGAGTATAAGGCCAACTCCAAATATGAAGAAGGTTATTCTCAAGGTCTGGGAAGGAGTGTGTTGGCATGTCCTTCCTTTACCCCCACCGCATACTTTGGAACAAATTGTTAGGAAAGACATGGCAAGAAATGGAACATGGATGGACCTTCGACTCGAAGCTGAAACAGTTGGTTTTGAAATGGGTGATGTCATTCTTGCAGAACTGATGGAAGATACAATACTGAGCCTTGTGAATCAAGTTAATGCTGTGTGCTTCAATTTGAACTGA 2745 0.3741 MAKRSQRFPVQYEKDQSGCMWGFISMFDFRHARITRKLIADKSHNNNHALGAVLTKNKFEVLSNLDEDYQGNMDRGESKRLTATTEADKLSVKKLIEEEMFIDQDEIKDQGNVVESTRTYLGSEDLLKTDSKRKRKSRMKSRDMDSNDLSATLKSEVTRNQYSNQQSRDNIDLDKIMEDFCQIEHACSLMHDDDDSKVLVQSNQKNINSEELESDAIHDFVNQMILNGKDMVEDKKFLCSHELMETLQVISSDKELFLKLLQDPNSHLLRYIQELENAQGRSEKECNSVADSNFSEQDLGNLKQPRDIVNRKYHKFFWKKVKSQSKVPTNKNVKTEIPNRIVILKPAPTRMQNSESENNVVSSLASHDIDHYKGPSVRVGSPFSLTEIKRKLRHAIGKEKHGNHKLPAEHQTNDSRGKGICKDKTGMKSPNKDHFFIEKIGRPMFDVVKGNNTGIHETGSTKEKVSNIYIEAKKHLSEMLVDNGDDNTSISSRQIPKTLGRILSLPEYNFSPLGSPGGNLEHNFLTTHARLSSSDKTWQVNEDSLSPKQDTYIDQPDQETNNSRNQSSVCDKRSNEVPVIESDSTFLHDLDHVDTAEVSYPVRDEIVAEGIVEFAKDIVLESSSDPNCCTAGKDQNHDVSKIAVDAKYSECLNGDLKENQQSSPLSSPSHSSITEKIEELESCTDVSGRPSPVSVLDIPFSDDDPGYSTCHPVKLRVQSLQIRFEEQDCSSMDRFHRRKSCLEENELIYDYISAVFHTASLTQDQLLIKCLSSDKILDPSLFDHVEFFSNMLCHEQKLLFDCINEVLMEVCWNYFGVSPWVSFVKPSIRPTPNMKKVILKVWEGVCWHVLPLPPPHTLEQIVRKDMARNGTWMDLRLEAETVGFEMGDVILAELMEDTILSLVNQVNAVCFNLN 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01807 914 PANTHER (, RELATED) 1 911 - -
Tsu04g01807 914 Pfam Domain of unknown function (DUF4378) 750 897 IPR025486 -
Tsu04g01807 914 MobiDBLite consensus disorder prediction 535 575 - -
Tsu04g01807 914 MobiDBLite consensus disorder prediction 400 427 - -
Tsu04g01807 914 MobiDBLite consensus disorder prediction 401 427 - -
Tsu04g01807 914 MobiDBLite consensus disorder prediction 535 573 - -
Tsu04g01807 914 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 911 - -
Tsu04g01807 914 MobiDBLite consensus disorder prediction 128 151 - -
Tsu04g01807 914 Pfam Protein of unknown function (DUF3741) 222 266 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01807 Tsu-Chr4 19390133 19395411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01807 1 885 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 33.407 2.59e-107 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01807 - - gmx:100783243 1176