Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01772 ATGACATCTTCATTTCAATGTAGCTTGTCAGTTTGGCTTGCTTATAGTGTACATGTTGTTTTTGGAGTTAGAAAAtgttttacaaacaaaaataaagtcGGCGCTATATCTTCATGTAGGTTTGTTTGTACTAAGGAAGGGAAAAATGAGATAAAGAAATCAAATGCTTATGCAAGCTTTCGCAGAGCTGAGACTAGAACAGATTGTAAAGCAAGAATTTCACTTGGGTGTAATAATGGAAAGTTTGTCATCCATGAATTTGTAGAGGATCATAACCATCCTCTACAACTTCCGGAGACAACACACTTGCTTGCATCACATAGAAAGATAACCGAAGAGGTGGCCGAGGCATCACTTTGTAAAGAGGACCTCAAGATTGTTGAAGAAAGTGTAGATGTCATGCGTAAGAAAATAATGGAGCGTTGCTCGCAAGCCAAAGAGAATGAAAGTCATAACAGTGATAATCCAACATTTCCAAATTGCGATGCTATGCAATCGAAGAGATTAAAGATACGACCTAATTTAAAGAGACAATCACAAAAGCAATTTAAGAGTTTCATTGATCTTCAACCTAGAGGGAAACCAAAAAAAGAGTTACACCTATCCAACAACCACATTCAAATGTCTAAGGTATATAAATTATGTGTAGATTGA 654 0.3532 MTSSFQCSLSVWLAYSVHVVFGVRKCFTNKNKVGAISSCRFVCTKEGKNEIKKSNAYASFRRAETRTDCKARISLGCNNGKFVIHEFVEDHNHPLQLPETTHLLASHRKITEEVAEASLCKEDLKIVEESVDVMRKKIMERCSQAKENESHNSDNPTFPNCDAMQSKRLKIRPNLKRQSQKQFKSFIDLQPRGKPKKELHLSNNHIQMSKVYKLCVD 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01772 217 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 178 - -
Tsu04g01772 217 Pfam FAR1 DNA-binding domain 14 96 IPR004330 -
Tsu04g01772 217 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 12 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01772 Tsu-Chr4 18948274 18949983 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu04g01772 FAR1 2.1e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01772 - - cam:101507947 162.54