Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g01765 ATGTCGATCTTCGACGGAGCTTTCATAAACACACAACTCTCCAAGCACACATCGATCTTCGGTCTCCGTTTATGGGTTGTAATTGGAATCTTAATCGGTGTTGTAATTGTCTTCATCCTCTTCTTAATCTCCCTTTGTGTAGTTTCTCGCCGGCGCCACCGTCGTACCGGCGACTACAAAATAACCGGAGCTACTCCAGCTAAAGAAATCCAAGAGATCGTGCATATTCCAGGGCCTCATATGCTCCGGCGACCAACTCCGGCGAAAGTACCGGAGATCCACGTGGATATAGGAAGACAAGAACACCGTGTGGTTGTTAAGTCAGATAGGGTTTCAAGTGGTGAGAGTAAAGGAACAGTTGGAAGTGGGTGTGAAACGACGTCGTCTTTTGGAAGTGGTAGTGTTGGTGGAATTGGACCTGAGGTATCACATCTTGGATGGGGAAGATGGTATACTTTGAGAGAGCTTGAAGATGCTACTGGTGGGTTGTGTCCAGAAAATGTTCTTGGTGAAGGTGGTTATGGAATTGTTTATCATGGTGTTCTTACTGATGGTACTAAAGTTGCTGTCAAAAATCTCTTGAATAACAAGGGCCAAGCTGAAAAAGAATTCAAAGTCGAGGTAGAAGCAATTGGTCGAGTACGGCACAAAAATCTTGTTAGGTTGCTTGGATATTGTGTTGAAGGGGCCTACAgGATGCTTGTGTATGAATATGTGGACAATGGCAATTTAGAACAGTGGTTGCATGGAGATGTTGGACCTGTAAGCCCTTTGACATGGGAAATACGCATGAATGTTATATTAGGAACAGCAAGAGGATTGGCCTATCTTCATGAAGGTCTCGAACCTAAGGTTGTTCACCGAGATGTAAAATCAAGCAACATCCTCCTCGATCGCCAATGGAACTCCAAGGTTTCTGATTTCGGGCTTGCCAAGCTTTTGAATTCTGAGAATAGTTATGTCACTACTCGAGTAATGGGGACATTTGGTTATGTTGCACCAGAATATGCCTGCACGGGAATGCTTACCGAGAAGAGTGATGTTTATAGCTTTGGGATACTTATCATGGAGATAATTACTGGTAGAAGTCCTGTTGATTATGCTAGACCACAAGGAGAGGTTAATTTAATAGAGTGGTTGAAGACTATGGTTGGTAATCGAAAAGCTGAGGAAGTAGTCGATCCTAAGCTACCTGAGATGCCATCTTCAAAGGCTCTTAAACGTGCTCTATTAATTGCTCTTCGGTGTGTTGATCCTGATGCAACAAAGAGGCCTAAAATGGGACATGTCATTCACATGCTCGAGGCAGACGACCTGTTATTCCATAATGATCGCAAAACTGGAGGAGAATCTTCGCGATCCCTTAATGATTTTCAACAAGAGCATGAGGATTCAAATTTGGAAAAGAGAACAAATGAAGGTATAAGTGTTGAAACTGAACATGGTAGTGCTAGAAATAATTATCAGTCAACTAGGGGGAGATGA 1485 0.431 MSIFDGAFINTQLSKHTSIFGLRLWVVIGILIGVVIVFILFLISLCVVSRRRHRRTGDYKITGATPAKEIQEIVHIPGPHMLRRPTPAKVPEIHVDIGRQEHRVVVKSDRVSSGESKGTVGSGCETTSSFGSGSVGGIGPEVSHLGWGRWYTLRELEDATGGLCPENVLGEGGYGIVYHGVLTDGTKVAVKNLLNNKGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGPVSPLTWEIRMNVILGTARGLAYLHEGLEPKVVHRDVKSSNILLDRQWNSKVSDFGLAKLLNSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYARPQGEVNLIEWLKTMVGNRKAEEVVDPKLPEMPSSKALKRALLIALRCVDPDATKRPKMGHVIHMLEADDLLFHNDRKTGGESSRSLNDFQQEHEDSNLEKRTNEGISVETEHGSARNNYQSTRGR 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g01765 494 MobiDBLite consensus disorder prediction 444 494 - -
Tsu04g01765 494 SUPERFAMILY Protein kinase-like (PK-like) 142 435 IPR011009 -
Tsu04g01765 494 SMART serkin_6 163 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01765 494 ProSitePatterns Protein kinases ATP-binding region signature. 169 191 IPR017441 GO:0005524
Tsu04g01765 494 Gene3D Phosphorylase Kinase; domain 1 140 238 - -
Tsu04g01765 494 Gene3D Transferase(Phosphotransferase) domain 1 239 447 - -
Tsu04g01765 494 MobiDBLite consensus disorder prediction 477 494 - -
Tsu04g01765 494 ProSiteProfiles Protein kinase domain profile. 163 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01765 494 PANTHER OS01G0323000 PROTEIN 1 486 - -
Tsu04g01765 494 Pfam Protein kinase domain 167 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu04g01765 494 MobiDBLite consensus disorder prediction 444 476 - -
Tsu04g01765 494 CDD STKc_IRAK 169 435 - -
Tsu04g01765 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Tsu04g01765 494 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g01765 Tsu-Chr4 18900153 18904809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g01765 150 435 Trihelix Transcription Factor Family AT5G38560 49.315 2.93e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Tsu04g01765 Pkinase 3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g01765 - - gmx:100817295 771.541